271 homologs were found in PanDaTox collection
for query gene SO_0367 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004347  SO_0367  hypothetical protein  100 
 
 
371 aa  760    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_0359  filamentation induced by cAMP protein Fic  92.27 
 
 
375 aa  707    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0336  filamentation induced by cAMP protein Fic  97.04 
 
 
371 aa  738    Shewanella sp. MR-7  Bacteria  normal  0.134655  normal  0.368234 
 
 
-
 
NC_008577  Shewana3_3804  filamentation induced by cAMP protein Fic  96.23 
 
 
371 aa  738    Shewanella sp. ANA-3  Bacteria  normal  0.539894  normal 
 
 
-
 
NC_009438  Sputcn32_3625  filamentation induced by cAMP protein Fic  93.53 
 
 
371 aa  717    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0369  filamentation induced by cAMP protein Fic  93.53 
 
 
371 aa  716    Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000333205 
 
 
-
 
NC_009997  Sbal195_0366  filamentation induced by cAMP protein Fic  93.07 
 
 
375 aa  697    Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0361  filamentation induced by cAMP protein Fic  94.61 
 
 
371 aa  724    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4506  filamentation induced by cAMP protein Fic  72.9 
 
 
365 aa  558  1e-158  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000000280664 
 
 
-
 
NC_010506  Swoo_4924  filamentation induced by cAMP protein Fic  72.19 
 
 
369 aa  544  1e-154  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.0000928256 
 
 
-
 
NC_008345  Sfri_3843  filamentation induced by cAMP protein Fic  68.19 
 
 
368 aa  510  1e-143  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5004  filamentation induced by cAMP protein Fic  55.01 
 
 
381 aa  398  9.999999999999999e-111  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_3619  filamentation induced by cAMP protein Fic  55.43 
 
 
376 aa  397  1e-109  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A0823  Fic family protein  55.43 
 
 
389 aa  397  1e-109  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_3490  Fic family protein  55.16 
 
 
376 aa  395  1e-109  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0677  hypothetical protein  53.66 
 
 
373 aa  387  1e-106  Pseudomonas aeruginosa PA7  Bacteria  decreased coverage  0.00227082  n/a   
 
 
-
 
NC_008463  PA14_07450  hypothetical protein  53.39 
 
 
373 aa  385  1e-106  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000039973  normal  0.18978 
 
 
-
 
NC_012560  Avin_42040  hypothetical protein  52.85 
 
 
386 aa  388  1e-106  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4817  filamentation induced by cAMP protein Fic  52.29 
 
 
379 aa  379  1e-104  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_4664  filamentation induced by cAMP protein Fic  50.14 
 
 
376 aa  377  1e-103  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.433809  normal 
 
 
-
 
NC_004578  PSPTO_0523  Fic family protein  50.95 
 
 
376 aa  369  1e-101  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3792  hypothetical protein  44.44 
 
 
365 aa  315  9e-85  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3312  hypothetical protein  45.04 
 
 
376 aa  314  9.999999999999999e-85  Bradyrhizobium sp. BTAi1  Bacteria  decreased coverage  0.00970462  normal 
 
 
-
 
NC_011883  Ddes_2357  filamentation induced by cAMP protein Fic  42.12 
 
 
371 aa  303  4.0000000000000003e-81  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1366  filamentation induced by cAMP protein Fic  43.13 
 
 
371 aa  295  1e-78  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4758  filamentation induced by cAMP protein Fic  43.16 
 
 
373 aa  293  3e-78  Polaromonas sp. JS666  Bacteria  normal  normal  0.179333 
 
 
-
 
NC_007974  Rmet_4648  hypothetical protein  43.75 
 
 
384 aa  292  5e-78  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00489554  normal 
 
 
-
 
NC_008062  Bcen_5763  filamentation induced by cAMP protein Fic  42.28 
 
 
374 aa  291  1e-77  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6128  filamentation induced by cAMP protein Fic  42.28 
 
 
374 aa  291  1e-77  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.399772 
 
 
-
 
NC_007514  Cag_0980  hypothetical protein  41.08 
 
 
367 aa  290  2e-77  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.0812833  n/a   
 
 
-
 
NC_003295  RSc3413  hypothetical protein  42.28 
 
 
371 aa  290  3e-77  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6610  filamentation induced by cAMP protein Fic  42.39 
 
 
374 aa  290  3e-77  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.763797  normal  0.578306 
 
 
-
 
NC_008048  Sala_2616  filamentation induced by cAMP protein Fic  41.46 
 
 
368 aa  288  7e-77  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_1441  hypothetical protein  42.63 
 
 
367 aa  288  1e-76  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4935  filamentation induced by cAMP protein Fic  43.22 
 
 
373 aa  285  7e-76  Burkholderia ambifaria AMMD  Bacteria  normal  0.684685  normal  0.113714 
 
 
-
 
NC_009483  Gura_3067  filamentation induced by cAMP protein Fic  41.13 
 
 
374 aa  285  8e-76  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1182  filamentation induced by cAMP protein Fic  41.03 
 
 
374 aa  285  9e-76  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0823  filamentation induced by cAMP protein Fic  39.95 
 
 
374 aa  284  1.0000000000000001e-75  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009997  Sbal195_0368  filamentation induced by cAMP protein Fic  90.73 
 
 
151 aa  283  3.0000000000000004e-75  Shewanella baltica OS195  Bacteria  normal  0.25447  normal 
 
 
-
 
NC_007509  Bcep18194_C7631  filamentation induced by cAMP protein, Fic  42.54 
 
 
386 aa  280  2e-74  Burkholderia sp. 383  Bacteria  normal  normal  0.223579 
 
 
-
 
NC_011365  Gdia_1770  filamentation induced by cAMP protein Fic  41.19 
 
 
370 aa  280  2e-74  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.385293  normal 
 
 
-
 
NC_007204  Psyc_1095  filamentation induced by cAMP protein (Fic) family protein  42.03 
 
 
374 aa  277  2e-73  Psychrobacter arcticus 273-4  Bacteria  normal  0.298399  normal  0.261915 
 
 
-
 
NC_009727  CBUD_0887  Fic family protein  41.24 
 
 
378 aa  276  3e-73  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1129  Fic family protein  41.24 
 
 
378 aa  275  6e-73  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4586  filamentation induced by cAMP protein Fic  40.43 
 
 
372 aa  271  2e-71  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.459231 
 
 
-
 
NC_013512  Sdel_2002  filamentation induced by cAMP protein Fic  37.67 
 
 
375 aa  262  6e-69  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.733317  n/a   
 
 
-
 
NC_009524  PsycPRwf_0723  filamentation induced by cAMP protein Fic  40.65 
 
 
373 aa  256  4e-67  Psychrobacter sp. PRwf-1  Bacteria  normal  0.43274  hitchhiker  0.00000454462 
 
 
-
 
NC_007575  Suden_0227  filamentation induced by cAMP protein Fic  37.07 
 
 
376 aa  255  1.0000000000000001e-66  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.0000000424748  n/a   
 
 
-
 
NC_009483  Gura_3069  filamentation induced by cAMP protein Fic  40.2 
 
 
309 aa  239  5.999999999999999e-62  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5385  filamentation induced by cAMP protein Fic  36.36 
 
 
370 aa  223  4.9999999999999996e-57  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3980  filamentation induced by cAMP protein Fic  34.35 
 
 
408 aa  213  3.9999999999999995e-54  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.231273 
 
 
-
 
NC_007969  Pcryo_1773  filamentation induced by cAMP protein Fic  38.04 
 
 
318 aa  210  3e-53  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.0104845 
 
 
-
 
NC_009955  Dshi_3755  filamentation induced by cAMP protein Fic  33.87 
 
 
372 aa  205  1e-51  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0523363  normal  0.297865 
 
 
-
 
NC_009957  Dshi_4031  filamentation induced by cAMP protein Fic  33.87 
 
 
372 aa  205  1e-51  Dinoroseobacter shibae DFL 12  Bacteria  normal  n/a   
 
 
-
 
NC_009426  Saro_3922  filamentation induced by cAMP protein Fic  35.83 
 
 
379 aa  203  3e-51  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.393872  n/a   
 
 
-
 
NC_011981  Avi_7373  hypothetical protein  35.22 
 
 
368 aa  203  5e-51  Agrobacterium vitis S4  Bacteria  normal  0.269183  n/a   
 
 
-
 
NC_008347  Mmar10_2315  filamentation induced by cAMP protein Fic  34.69 
 
 
376 aa  199  5e-50  Maricaulis maris MCS10  Bacteria  normal  0.655269  normal 
 
 
-
 
NC_012853  Rleg_5477  filamentation induced by cAMP protein Fic  34.23 
 
 
367 aa  199  6e-50  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3797  filamentation induced by cAMP protein Fic  34.95 
 
 
371 aa  199  1.0000000000000001e-49  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.117208 
 
 
-
 
NC_007778  RPB_2127  filamentation induced by cAMP protein Fic  33.33 
 
 
367 aa  192  6e-48  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.296141  normal 
 
 
-
 
NC_009720  Xaut_0591  filamentation induced by cAMP protein Fic  32.71 
 
 
373 aa  190  2.9999999999999997e-47  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009430  Rsph17025_4231  hypothetical protein  35.56 
 
 
364 aa  186  6e-46  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.758484 
 
 
-
 
NC_006368  lpp1091  hypothetical protein  30.38 
 
 
369 aa  163  5.0000000000000005e-39  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009621  Smed_6016  filamentation induced by cAMP protein Fic  34.89 
 
 
343 aa  160  3e-38  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.00688605 
 
 
-
 
NC_010338  Caul_4776  filamentation induced by cAMP protein Fic  33.23 
 
 
313 aa  151  2e-35  Caulobacter sp. K31  Bacteria  normal  0.199218  normal  0.836687 
 
 
-
 
NC_009654  Mmwyl1_4024  hypothetical protein  35.53 
 
 
156 aa  86.7  6e-16  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_4190  filamentation induced by cAMP protein Fic  24.74 
 
 
367 aa  81.6  0.00000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2152  filamentation induced by cAMP protein Fic  27.92 
 
 
374 aa  79  0.0000000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.164511  normal  0.297035 
 
 
-
 
NC_007955  Mbur_1635  filamentation induced by cAMP protein Fic  29.59 
 
 
326 aa  77.4  0.0000000000003  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_011059  Paes_2299  filamentation induced by cAMP protein Fic  25.79 
 
 
361 aa  76.3  0.0000000000008  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0294  filamentation induced by cAMP protein Fic  28.97 
 
 
359 aa  75.5  0.000000000001  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1972  filamentation induced by cAMP protein Fic  30.16 
 
 
349 aa  74.3  0.000000000003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.335925  n/a   
 
 
-
 
NC_013165  Shel_24620  hypothetical protein  26.12 
 
 
346 aa  72.8  0.00000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.996918  normal 
 
 
-
 
NC_009727  CBUD_2174  Fic family protein  25 
 
 
348 aa  72  0.00000000001  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2207  hypothetical protein  25 
 
 
348 aa  72  0.00000000001  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.00000284697  n/a   
 
 
-
 
NC_009832  Spro_0565  filamentation induced by cAMP protein Fic  30.57 
 
 
358 aa  68.6  0.0000000002  Serratia proteamaculans 568  Bacteria  hitchhiker  0.0018431  normal 
 
 
-
 
NC_009455  DehaBAV1_0190  filamentation induced by cAMP protein Fic  27.8 
 
 
384 aa  67.8  0.0000000003  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1551  hypothetical protein  26.01 
 
 
314 aa  67  0.0000000004  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0937  filamentation induced by cAMP protein Fic  24.82 
 
 
368 aa  67.4  0.0000000004  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD1314  Fic family protein  27.36 
 
 
359 aa  65.1  0.000000002  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  0.148349  n/a   
 
 
-
 
NC_009253  Dred_0817  filamentation induced by cAMP protein Fic  31.98 
 
 
256 aa  65.5  0.000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4167  filamentation induced by cAMP protein Fic  33.64 
 
 
351 aa  64.7  0.000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.120401  normal 
 
 
-
 
NC_008942  Mlab_0909  hypothetical protein  24.36 
 
 
328 aa  64.7  0.000000002  Methanocorpusculum labreanum Z  Archaea  normal  0.27357  normal 
 
 
-
 
NC_013739  Cwoe_5696  filamentation induced by cAMP protein Fic  26.19 
 
 
358 aa  63.9  0.000000004  Conexibacter woesei DSM 14684  Bacteria  decreased coverage  0.00196433  normal 
 
 
-
 
NC_007514  Cag_0831  AsnC family regulatory protein  28.35 
 
 
349 aa  63.9  0.000000004  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.00000000889639  n/a   
 
 
-
 
NC_013744  Htur_3972  filamentation induced by cAMP protein Fic  28 
 
 
385 aa  63.9  0.000000005  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_008309  HS_0216  hypothetical protein  25.45 
 
 
373 aa  63.9  0.000000005  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2308  filamentation induced by cAMP protein Fic  33.02 
 
 
349 aa  63.9  0.000000005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0673  filamentation induced by cAMP protein Fic  30.1 
 
 
398 aa  63.5  0.000000006  Frankia sp. CcI3  Bacteria  normal  0.974543  normal  0.0892383 
 
 
-
 
NC_002978  WD0346  Fic family protein  33.02 
 
 
360 aa  63.2  0.000000008  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  0.361104  n/a   
 
 
-
 
NC_009634  Mevan_0095  filamentation induced by cAMP protein Fic  26.09 
 
 
429 aa  62.8  0.000000009  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_007908  Rfer_4037  filamentation induced by cAMP protein Fic  26.83 
 
 
360 aa  62.4  0.00000001  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0365  Fic family protein  28.32 
 
 
348 aa  61.6  0.00000002  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1889  filamentation induced by cAMP protein Fic  22.7 
 
 
454 aa  61.6  0.00000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_0055  filamentation induced by cAMP protein Fic  25.47 
 
 
434 aa  61.6  0.00000002  Methanococcus maripaludis C6  Archaea  normal  0.0125874  n/a   
 
 
-
 
NC_004116  SAG2119  hypothetical protein  26.82 
 
 
373 aa  60.5  0.00000004  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2123  hypothetical protein  27.32 
 
 
368 aa  60.5  0.00000004  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1798  filamentation induced by cAMP protein Fic  25.81 
 
 
427 aa  60.8  0.00000004  Xylanimonas cellulosilytica DSM 15894  Bacteria  hitchhiker  0.000000635308  n/a   
 
 
-
 
NC_009051  Memar_1471  filamentation induced by cAMP protein Fic  23.44 
 
 
369 aa  60.5  0.00000004  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2238  filamentation induced by cAMP protein Fic  23.1 
 
 
485 aa  60.5  0.00000005  Shewanella baltica OS195  Bacteria  normal  0.76756  decreased coverage  0.000875847 
 
 
-
 
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