| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4506 |
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| Symbol | |
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| ID | 5612436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 5512518 |
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| End bp | 5513615 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640935483 |
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| Product | filamentation induced by cAMP protein Fic |
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| Protein accession | YP_001476236 |
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| Protein GI | 157377636 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3177] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000280664 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGGATTT GGCAACAAGC GGATTGGCCT AACTTTCATT GGGAAAACGA TAGCATTGCA
CTGTTAATGC GTCAGATTAG ATTCAATCAG GGTCTGCTCC TTGGTAAGTT GGATAAAGAG
CCAGCCGCTC AGGTAACTCT CGATACCCTT TTAGCCAATA TCATCCACTC CAGCGCCATC
GAAGGTGAAA AGCTCAACGC GTTCTCTGTA CGCTCATCTT TGGCAAACAA ACTAGGGATC
AGTGATGAAA AACCATTTCC CACCACAGTG CAAACCGATG GGTTAGCCGA AATGACGGTA
GATGCCCTTC AAAACTGGCA AGCACAGTTA AGCTTACAGC GAATAATGGA TTGGCATAAG
TTACTATTTC CAGAAGGTTA CACTCTGTTT AATCCCGTTC AAGGTGGCGC ACTGAGAGGG
GATGAACCTA TGCAAGTTGT ATCAGGCCGA ATAGATAAGC CCAAAGTACA TTTCGAAGCC
CCTCCCCGTT CTGTGCTCGA AGGTGAACTA ACAAGGTTTA TTAACTGGTT TAATGAATCA
CTGGATGATA TTGCAATGGA TCCATTAATC CGTGCAGCCA TCACCCACCT TTGGTTCGTT
ACTCTGCATC CGCTCGATGA TGGCAATGGC AGAATAACCC GATTACTCAC AGACTTAGCA
CTAGCTCAGG CTGAAAACCG TTCTATTCAT TTTTATGCCA TGTCGGTGAG CATCCTCGAG
CGTAGACAGG CCTATTACGA TATTTTAGAG AGTACTCAAA AAGGCGAGTT GGATATTACC
CTTTGGCTGG TCTGGTTTCT GGAAACACTC AATGACAGCC TCCAAAAGTC ACTGAATGAT
GTAGCCCTGA CAGTGGAAAA AACCAACTAT TGGCAACGTG TAGATCAAAC CTTATTGACA
GCTGAACAAG TAAAAGTGCT TAACCGCTTA CTAAACGGCG AGTTTGAGAT AGGCATAAGT
AGTAGCCAAT ATCAAAAGGT AGCCAAGGTG AGCCGTGCAA CGGCTACCCG TCATCTGGCT
CAATTGGTCG AACAAGGTTT TTTAGTTAAA GCGGGAGCTG GTGGACGAAG TACCCGTTAC
TTGCTGGCTA GCAAGTAA
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| Protein sequence | MWIWQQADWP NFHWENDSIA LLMRQIRFNQ GLLLGKLDKE PAAQVTLDTL LANIIHSSAI
EGEKLNAFSV RSSLANKLGI SDEKPFPTTV QTDGLAEMTV DALQNWQAQL SLQRIMDWHK
LLFPEGYTLF NPVQGGALRG DEPMQVVSGR IDKPKVHFEA PPRSVLEGEL TRFINWFNES
LDDIAMDPLI RAAITHLWFV TLHPLDDGNG RITRLLTDLA LAQAENRSIH FYAMSVSILE
RRQAYYDILE STQKGELDIT LWLVWFLETL NDSLQKSLND VALTVEKTNY WQRVDQTLLT
AEQVKVLNRL LNGEFEIGIS SSQYQKVAKV SRATATRHLA QLVEQGFLVK AGAGGRSTRY
LLASK
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