Gene Shewana3_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3804 
Symbol 
ID4480014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4568836 
End bp4569951 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content47% 
IMG OID639728417 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_871428 
Protein GI117922236 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.539894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGATTT GGCAGCAAGT CGATTGGCCT AAATTTCATT GGAATATCAG CAGAGTTGAT 
GCCCTGATAC GTCAGGTATA TTTCAATCAG GGCCAACTGC TCGGCAAGCA AATGCTAAGT
CACGACGACA GCCAGTTAAC CTCAGCGGCG GCACTCAACA CCTTACTCGC TAACATTATC
CACTCCAGTG CCATTGAAGG TGAAAAGCTC AATGCGGCTT CGGTGCGCTC ATCCTTGGCT
AAAAAACTCG GTGTGTCCGA AGACAAACCG TATCCGACCA CTGCGCAAAC CGATGGTTTG
GCTGACATTA TGCTCGATGC CTTAAAAAAT TTAGATACAG AGTTAACCCT TGAGCGGATA
TTAGGTTGGC ATAAACAGTT ATTTCCCCAG GGTTATACGC TCTTTAACCC CGTTATTGGT
GGAGTGCTAC GTGGCGATAC GCCTATGCAA GTTGTCTCAG GCCGGATTGA TAAACCAACG
GTACATTTTG AGGCACCCTC TCGAGCGACG TTGGACGCTG AACTCTCGCA GTTTATTGAA
TGGTTTAATG CATCAAGGCA AGATCTGGGT TTAGATCCGC TTATCCGCGC GGCGATAACT
CACCTTTGGT TTGTGACTCT ACACCCCCTT GATGATGGAA ATGGGCGCAT CACGCGTTTA
TTGACCGATT TAGCTTTGGC GCAAGCGGAA AAACGCTCAA TTCGCTTTTA CGCTATGTCG
GTCAGTATTC TGGCCCGTCG CCAAGCCTAC TATGACATTT TAGAGTCCAC CCAAAGGGGT
AATGTCGATA TTACTCCTTG GTTAGTATGG TTTTTTGAAA CCCTTAATGA TTGCTTACTC
AATGCGATGG GAGAGGTGAA CAAGACTCTT CGGAAAACGC AGTATTGGCA AAATCTCGAT
CAATCCTTAT TGAGTCAAGA GCAAGCCAAA GTGCTCAATC GGATGTTAGA TGGCGATTTT
GAATTAGGAA TGAATAGTAG CCAGTATCAA AAGGTCGCTA AGGTGAGCCG AGCCACAGCC
ACCCGTCACC TTGCGCAAAT GGTCGAGCAA GGCTTTTTAG TAAAAGCCGA CGCCGGCGGC
CGAAGTACGA GGTACTTATT GCCGAGTGGG AAGTAG
 
Protein sequence
MWIWQQVDWP KFHWNISRVD ALIRQVYFNQ GQLLGKQMLS HDDSQLTSAA ALNTLLANII 
HSSAIEGEKL NAASVRSSLA KKLGVSEDKP YPTTAQTDGL ADIMLDALKN LDTELTLERI
LGWHKQLFPQ GYTLFNPVIG GVLRGDTPMQ VVSGRIDKPT VHFEAPSRAT LDAELSQFIE
WFNASRQDLG LDPLIRAAIT HLWFVTLHPL DDGNGRITRL LTDLALAQAE KRSIRFYAMS
VSILARRQAY YDILESTQRG NVDITPWLVW FFETLNDCLL NAMGEVNKTL RKTQYWQNLD
QSLLSQEQAK VLNRMLDGDF ELGMNSSQYQ KVAKVSRATA TRHLAQMVEQ GFLVKADAGG
RSTRYLLPSG K