Gene Slin_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2152 
Symbol 
ID8725890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2608487 
End bp2609611 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content50% 
IMG OID 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_003386979 
Protein GI284037049 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.164511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.297035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTG TTTTAACGCC TTTACCACCC AAGGTTGATC TGGAAACCCG CGTAGTGCTA 
CGCAAAGTGG CTGCCGCACA TCGGTATCTG GCAGAGCTTA AGGGCGTAGC GGCTACGATT
CCGAACGAAT CAATCTTGAT CAACACCCTG GCCCTACAGG AAGCGAAAGA CTCTTCAGCA
GTAGAAAACA TCATTACCAC CCATGACGAT CTGTTTAGAG CCGAACTCTT CACCGATACC
TCTACCAGCC CGGCAACCAA AGAAGTACAA CGCTATGCCA GTGCCCTAAA AAAAGGATTT
GCCTTAGTGC GCCAACAAAA GCTGCTGACT CTACGACACA TTATAGCCAT TCAGCAGGAA
TTGGAGCAGA ATAATACCGG TTTTCGACGG TTACCTGGCA CAACGCTCCG TAACGGAGAA
ACCGGAGAGG TCGTCTACAC GCCCCCGCAG GAAGCTGACC AGATTGCAAG CCTGATGACT
AACCTCGAAG CGTTTATCAA CGACGACACC CTATTCGATG CCGACCCGCT GGTAAAGATG
GCGGTTGTGC ATTACCAGTT TGAAAGCATC CACCCCTTTT GCGATGGAAA CGGGCGTATT
GGCCGAATTA TCAATATGCT GTATCTGGTG CAGAAAGACC TGCTCCATTT GCCTATCCTC
TACATGAGTC GGTACATTAT TCAGCATAAG AGCGGCTACT ACGAACGGCT ACAGGCCGTG
CGCGACCAAC AGGATTGGGA GGGCTGGCTA CTGTATATGC TGGATGGGGT AGAACAAACG
GCCCGACAAA CCATTGTGCT GGTAGAGGCT ATTCGAGAGC TGATGCTGCA CTACAAGCAC
ACGCTGCGGC AGCGGTTGCC CAAGCTTTAC AGTCAGAACT TGCTTAACAA CTTGTTTCAG
CATCCTTACA CCAAGATTGA TTTTCTGATG GCGGACTTGC ACGTGACACG CCTGACGGCC
ACTCGCTATC TGGACTTACT GACCGAGCAG GGCTTTGTGC ATAAACAGAA GATTGGGCGT
AATAATTACT ACATCAATCA AGCGTTGATG AAACTGTTTG TGGATGTAGG CAATAGCCAA
CCGGATGGGC CTACTCCATT GATTCAGACA ACGTCTCATA GCTAA
 
Protein sequence
MAFVLTPLPP KVDLETRVVL RKVAAAHRYL AELKGVAATI PNESILINTL ALQEAKDSSA 
VENIITTHDD LFRAELFTDT STSPATKEVQ RYASALKKGF ALVRQQKLLT LRHIIAIQQE
LEQNNTGFRR LPGTTLRNGE TGEVVYTPPQ EADQIASLMT NLEAFINDDT LFDADPLVKM
AVVHYQFESI HPFCDGNGRI GRIINMLYLV QKDLLHLPIL YMSRYIIQHK SGYYERLQAV
RDQQDWEGWL LYMLDGVEQT ARQTIVLVEA IRELMLHYKH TLRQRLPKLY SQNLLNNLFQ
HPYTKIDFLM ADLHVTRLTA TRYLDLLTEQ GFVHKQKIGR NNYYINQALM KLFVDVGNSQ
PDGPTPLIQT TSHS