Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2152 |
Symbol | |
ID | 8725890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2608487 |
End bp | 2609611 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | filamentation induced by cAMP protein Fic |
Protein accession | YP_003386979 |
Protein GI | 284037049 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.164511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.297035 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTTG TTTTAACGCC TTTACCACCC AAGGTTGATC TGGAAACCCG CGTAGTGCTA CGCAAAGTGG CTGCCGCACA TCGGTATCTG GCAGAGCTTA AGGGCGTAGC GGCTACGATT CCGAACGAAT CAATCTTGAT CAACACCCTG GCCCTACAGG AAGCGAAAGA CTCTTCAGCA GTAGAAAACA TCATTACCAC CCATGACGAT CTGTTTAGAG CCGAACTCTT CACCGATACC TCTACCAGCC CGGCAACCAA AGAAGTACAA CGCTATGCCA GTGCCCTAAA AAAAGGATTT GCCTTAGTGC GCCAACAAAA GCTGCTGACT CTACGACACA TTATAGCCAT TCAGCAGGAA TTGGAGCAGA ATAATACCGG TTTTCGACGG TTACCTGGCA CAACGCTCCG TAACGGAGAA ACCGGAGAGG TCGTCTACAC GCCCCCGCAG GAAGCTGACC AGATTGCAAG CCTGATGACT AACCTCGAAG CGTTTATCAA CGACGACACC CTATTCGATG CCGACCCGCT GGTAAAGATG GCGGTTGTGC ATTACCAGTT TGAAAGCATC CACCCCTTTT GCGATGGAAA CGGGCGTATT GGCCGAATTA TCAATATGCT GTATCTGGTG CAGAAAGACC TGCTCCATTT GCCTATCCTC TACATGAGTC GGTACATTAT TCAGCATAAG AGCGGCTACT ACGAACGGCT ACAGGCCGTG CGCGACCAAC AGGATTGGGA GGGCTGGCTA CTGTATATGC TGGATGGGGT AGAACAAACG GCCCGACAAA CCATTGTGCT GGTAGAGGCT ATTCGAGAGC TGATGCTGCA CTACAAGCAC ACGCTGCGGC AGCGGTTGCC CAAGCTTTAC AGTCAGAACT TGCTTAACAA CTTGTTTCAG CATCCTTACA CCAAGATTGA TTTTCTGATG GCGGACTTGC ACGTGACACG CCTGACGGCC ACTCGCTATC TGGACTTACT GACCGAGCAG GGCTTTGTGC ATAAACAGAA GATTGGGCGT AATAATTACT ACATCAATCA AGCGTTGATG AAACTGTTTG TGGATGTAGG CAATAGCCAA CCGGATGGGC CTACTCCATT GATTCAGACA ACGTCTCATA GCTAA
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Protein sequence | MAFVLTPLPP KVDLETRVVL RKVAAAHRYL AELKGVAATI PNESILINTL ALQEAKDSSA VENIITTHDD LFRAELFTDT STSPATKEVQ RYASALKKGF ALVRQQKLLT LRHIIAIQQE LEQNNTGFRR LPGTTLRNGE TGEVVYTPPQ EADQIASLMT NLEAFINDDT LFDADPLVKM AVVHYQFESI HPFCDGNGRI GRIINMLYLV QKDLLHLPIL YMSRYIIQHK SGYYERLQAV RDQQDWEGWL LYMLDGVEQT ARQTIVLVEA IRELMLHYKH TLRQRLPKLY SQNLLNNLFQ HPYTKIDFLM ADLHVTRLTA TRYLDLLTEQ GFVHKQKIGR NNYYINQALM KLFVDVGNSQ PDGPTPLIQT TSHS
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