Gene Pfl01_5004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5004 
Symbol 
ID3714670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5640481 
End bp5641626 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content59% 
IMG OID 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_350732 
Protein GI77461225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTC ACTGGATCTG GCAGCAACCC GATTGGCCCG ACTTCAACTG GCAGGCAGAG 
CATCTCACTG CGCTGTTGCG CGAATGCGTT CAGGCGCAGG GACAATTGAT GGGCATGGCG
GGATCAGTGG GCAATTCACT GAGCGCTCAG ACTGAGCTGG ACGCGTTGCT GCAGAACATC
GTGACCTCCT CGGCCATCGA GGGGGAGCAG TTGAATATTG AATCCGTGCG TTCTTCATTG
GCACGACGTC TGGGGCTGGA ATCACCGGAT GGCGACAACG TCAGCAAGCG CAGCGAGGGG
CTGGCGCAAC TGATGCTCGA TGCCACTCAA CGTTTTGCCG AACCGCTGAC GCTGGAACGA
TTGCTGGAAT GGCACTCATG GCTGTTTCCA GAACAGGAGA GTGGTTTCCT TTCGCGAGCA
ATCAATGTAG GCGCATTACG CGGCGATGAG CCGATGCAGG TGGTTTCCGG GCGAATCGAC
CGCCCGACCG TGCACTTCGA GGCGCCACCG CGACAAGGGC TTGAGCGACA ACTCGACAGT
TTTCTCACAT GGTTCGACGC CAGTCAGCAT CAGGCAGGCC TCGATCCTTT GCTGCGAGCA
GGCATCGCGC ATTTCTGGTT CGTCACCTTG CACCCGTTCG ATGACGGCAA CGGGCGCCTG
ACTCGCATCC TCACCGATCT GGCATTGGCT CAAGGCGAAG CGCAGGCCAT TCGTTTTTAT
GCGATGTCCG CCAGCATTCT CGACGACCGC GCGGGCTATT ACCGGATTCT CGAATCGAGC
CAGAAAGCCA CGCTGGACAT CACAGACTGG CTCGCATGGT TCCTGCAAAC CCTGCTGCGC
AGTCTGCAAC AGGCCATCGC GCGGATTGAA AGTGTGTTGG GAAAATCACG CTTCTGGCAG
GCGCACCGGG AATCCGGGCT GTCGGCGGAG CAGATCAAAG TGCTCAATCG TTTGCTCGAC
GGTGGTGAGC GCGGTTTCGA ACACGGTATC AGCGCAGCGC AATACCAGAG TGTGGCCAAG
GTCTCCAAAG CCACGGCCAC CCGACATCTG GCGGAACTGC TGGAAAAGGG CTGCCTGCAA
CGTCTTCCGG GCGGCGGACG CAGCACTCGG TATCAGATTC AATATCCTGG CGAATCGACC
GACTGA
 
Protein sequence
MATHWIWQQP DWPDFNWQAE HLTALLRECV QAQGQLMGMA GSVGNSLSAQ TELDALLQNI 
VTSSAIEGEQ LNIESVRSSL ARRLGLESPD GDNVSKRSEG LAQLMLDATQ RFAEPLTLER
LLEWHSWLFP EQESGFLSRA INVGALRGDE PMQVVSGRID RPTVHFEAPP RQGLERQLDS
FLTWFDASQH QAGLDPLLRA GIAHFWFVTL HPFDDGNGRL TRILTDLALA QGEAQAIRFY
AMSASILDDR AGYYRILESS QKATLDITDW LAWFLQTLLR SLQQAIARIE SVLGKSRFWQ
AHRESGLSAE QIKVLNRLLD GGERGFEHGI SAAQYQSVAK VSKATATRHL AELLEKGCLQ
RLPGGGRSTR YQIQYPGEST D