Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_24620 |
Symbol | |
ID | 8396350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2728719 |
End bp | 2729759 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644987208 |
Product | hypothetical protein |
Protein accession | YP_003144819 |
Protein GI | 257065147 |
COG category | [S] Function unknown |
COG ID | [COG3177] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.996918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTACGT TCGACTACGG TCATCTTCCT CAGAAACTGT ACAGCGGCAA AATCGCCGAC GCACATATGA GGGTATATGA AGACAGGGGA AAGCTCGGTG TGATCGAGCA GATGCACCCC GAGCTGCTGG AGCCGCTGAA GGCGGTTGCC TTGGCGGACA GCGTTGCTGC ATCCACGCGT ATCGAGGGGT TTCCCATTGA CACCGCCCGT GCAGCCAAGT TGATGGAAGG CGCCGATCCT GTGGGCGAGA CCGAGCGGCA GGTTATCGGC TACGGCAACG CGCTGGCGCT CATAAACGCC GATCCGGATG CGTTCGACTT GACCACGGCG ACGGCGGTTA AGTTGTTCGA GACGCTGTAC GGCCATCGCA ATTTGGGCCG CAAAAGCCGC TACCGTAAGA AAGACTATAT ATATGTACAG GTGGACGGTC ATTCCCAGGC GGTGCCGGTA AGCCCCATTA CGGCGTTCGA GACCCCGTTG GTGTTAGGCG GCGCCTGCGA CAGCCTGGCA GATACCTTCG CCGTTTCCGC CGGCAACCCG TTGGTGCAGG CCGCCGTGTT CACCGTCGAC TTCATGTGCA TCCGCCCCTT CGACGAGGGA AACGGCCGCA TCGCGCGCCT GTTAGCCGAC CTGTTGATGA GGAAGGCGGG TTTCGACGTG TCCCGCTACA TGAGCGTGGA CCGTACTATC GAAGACGAGG CCATGGCCTA CTACGATGCC CTCAACAGCA GCGTGGAAGG TTGGGATCGG GGTGCAAACG ACTACTCGCC CTATGTGCTT TACTGGCTCG AGCTGTTGCA TAAGGTGTAC GGCCGCCTTT TCGACGCCGT GGACGCGGCG GCCAATGCGC CCAGCGGCAA GTCCGAGCGG GTGCGAGCCT TCGTCCGGCA GGCGGCAGGC CCTGTGACCA AGCGGCAGAT TCTGGACGCG AACACTGACA TCAGCGAAGC CACCGTGGAA AACGCGCTGG GCAAGATGGT GAAAGCCGGC GAGGTGGAGA AGCTGGGCGC GGGCAGGTCT ACCGCCTACC GCTGGTTGTA A
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Protein sequence | MRTFDYGHLP QKLYSGKIAD AHMRVYEDRG KLGVIEQMHP ELLEPLKAVA LADSVAASTR IEGFPIDTAR AAKLMEGADP VGETERQVIG YGNALALINA DPDAFDLTTA TAVKLFETLY GHRNLGRKSR YRKKDYIYVQ VDGHSQAVPV SPITAFETPL VLGGACDSLA DTFAVSAGNP LVQAAVFTVD FMCIRPFDEG NGRIARLLAD LLMRKAGFDV SRYMSVDRTI EDEAMAYYDA LNSSVEGWDR GANDYSPYVL YWLELLHKVY GRLFDAVDAA ANAPSGKSER VRAFVRQAAG PVTKRQILDA NTDISEATVE NALGKMVKAG EVEKLGAGRS TAYRWL
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