Gene Shel_24620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24620 
Symbol 
ID8396350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2728719 
End bp2729759 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content61% 
IMG OID644987208 
Producthypothetical protein 
Protein accessionYP_003144819 
Protein GI257065147 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.996918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACGT TCGACTACGG TCATCTTCCT CAGAAACTGT ACAGCGGCAA AATCGCCGAC 
GCACATATGA GGGTATATGA AGACAGGGGA AAGCTCGGTG TGATCGAGCA GATGCACCCC
GAGCTGCTGG AGCCGCTGAA GGCGGTTGCC TTGGCGGACA GCGTTGCTGC ATCCACGCGT
ATCGAGGGGT TTCCCATTGA CACCGCCCGT GCAGCCAAGT TGATGGAAGG CGCCGATCCT
GTGGGCGAGA CCGAGCGGCA GGTTATCGGC TACGGCAACG CGCTGGCGCT CATAAACGCC
GATCCGGATG CGTTCGACTT GACCACGGCG ACGGCGGTTA AGTTGTTCGA GACGCTGTAC
GGCCATCGCA ATTTGGGCCG CAAAAGCCGC TACCGTAAGA AAGACTATAT ATATGTACAG
GTGGACGGTC ATTCCCAGGC GGTGCCGGTA AGCCCCATTA CGGCGTTCGA GACCCCGTTG
GTGTTAGGCG GCGCCTGCGA CAGCCTGGCA GATACCTTCG CCGTTTCCGC CGGCAACCCG
TTGGTGCAGG CCGCCGTGTT CACCGTCGAC TTCATGTGCA TCCGCCCCTT CGACGAGGGA
AACGGCCGCA TCGCGCGCCT GTTAGCCGAC CTGTTGATGA GGAAGGCGGG TTTCGACGTG
TCCCGCTACA TGAGCGTGGA CCGTACTATC GAAGACGAGG CCATGGCCTA CTACGATGCC
CTCAACAGCA GCGTGGAAGG TTGGGATCGG GGTGCAAACG ACTACTCGCC CTATGTGCTT
TACTGGCTCG AGCTGTTGCA TAAGGTGTAC GGCCGCCTTT TCGACGCCGT GGACGCGGCG
GCCAATGCGC CCAGCGGCAA GTCCGAGCGG GTGCGAGCCT TCGTCCGGCA GGCGGCAGGC
CCTGTGACCA AGCGGCAGAT TCTGGACGCG AACACTGACA TCAGCGAAGC CACCGTGGAA
AACGCGCTGG GCAAGATGGT GAAAGCCGGC GAGGTGGAGA AGCTGGGCGC GGGCAGGTCT
ACCGCCTACC GCTGGTTGTA A
 
Protein sequence
MRTFDYGHLP QKLYSGKIAD AHMRVYEDRG KLGVIEQMHP ELLEPLKAVA LADSVAASTR 
IEGFPIDTAR AAKLMEGADP VGETERQVIG YGNALALINA DPDAFDLTTA TAVKLFETLY
GHRNLGRKSR YRKKDYIYVQ VDGHSQAVPV SPITAFETPL VLGGACDSLA DTFAVSAGNP
LVQAAVFTVD FMCIRPFDEG NGRIARLLAD LLMRKAGFDV SRYMSVDRTI EDEAMAYYDA
LNSSVEGWDR GANDYSPYVL YWLELLHKVY GRLFDAVDAA ANAPSGKSER VRAFVRQAAG
PVTKRQILDA NTDISEATVE NALGKMVKAG EVEKLGAGRS TAYRWL