Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3413 |
Symbol | |
ID | 1222277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3689968 |
End bp | 3691083 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637239830 |
Product | hypothetical protein |
Protein accession | NP_521532 |
Protein GI | 17548130 |
COG category | [S] Function unknown |
COG ID | [COG3177] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCG GAGATTGGCT CTACATCTGG CAGGCGCCCG AATGGCCCGC CCTGCACTAC GACCTTGCAG CGCTGGCAGG CCCGCTGACG GAGGTTGCGC GTGCGCAAGG CCTTCTGCTG GGCCGCCTGG CTGACGTCGG CATGGACATG CGCGACCAGG CCAGCCTTGC TGCCCTCACC AACGACGTCC TCAAGACCAG CGAGATCGAA GGCGAACGGC TCGATGCCGA GTCGGTGCGT TCGTCCATCG CCCGTCATCT GGGGGTCGAT ATCGGCGCAT TGGCCCCCGT GGACCGGCAC GTGGAAGGCG TGGTCGAGAT GGTGTTGGAT GCCACGCTTC ACTGCGATGC GCCGGTCACG GTCGAACGCC TGTTCGGCTG GCACGCCGCG CTCTTCCCCA TCGGCTACAG CGGCTTATCC CGCTTGCGCG TGGGAGCCTG GCGCGATGAT GCCAAGGGCG CGATGCAGGT GATTTCCGGC CCGATGCACC GGCCGCGCGT CCATGTCGAA GCGCCGCCCG CGGACCGGCT GGACGCGGAG GTGGCCCGCT TGATCGACTG GGTCAACGCG CAGACCTCGG ACCCGCCCCT CCTCAAGGCC GGTCTGGCGC ATCTGTGGTT CGTCACGCTG CATCCCTTCG ACGACGGCAA CGGCCGCATC GCGCGCGCCC TCGGCGATCT GCTGCTGGCC CGGGCGGATG GCAGCCCGCA GCGGTTCTAC AGCCTGTCCG CGCAGATTCA GCGCGAGCGG AAGGACTACT ACGACATGCT CGAACGGACC CAGAAAGGCA CGCTCGACGT GACCGGCTGG CTGGCGTGGT TTCTCGGCGC GCTCCACCGG GCCGTCGGGA GCGCCCAGCA TACGCTCGAC GCCGTCCTCG CCAAGACGCG CTTCTGGCAG CGTTGGGCCG CCACGCCGAT GAACGGCCGG CAGGTCAAGC TGCTCAACCG CCTGCTCGAC GGATTCGAGG GCAAGCTCAC CAGCAGCAAA TGGGCCGCGA TGGCCAAGTG TTCAGCGGAT ACGGCGCTGC GGGATATCAA CGAACTGCTT GCGCTGGGCG TGCTGCGCAA GTCCGATGCG GGCGGGCGCA GCACGTCCTA CGAACTGACG GGCTGA
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Protein sequence | MKRGDWLYIW QAPEWPALHY DLAALAGPLT EVARAQGLLL GRLADVGMDM RDQASLAALT NDVLKTSEIE GERLDAESVR SSIARHLGVD IGALAPVDRH VEGVVEMVLD ATLHCDAPVT VERLFGWHAA LFPIGYSGLS RLRVGAWRDD AKGAMQVISG PMHRPRVHVE APPADRLDAE VARLIDWVNA QTSDPPLLKA GLAHLWFVTL HPFDDGNGRI ARALGDLLLA RADGSPQRFY SLSAQIQRER KDYYDMLERT QKGTLDVTGW LAWFLGALHR AVGSAQHTLD AVLAKTRFWQ RWAATPMNGR QVKLLNRLLD GFEGKLTSSK WAAMAKCSAD TALRDINELL ALGVLRKSDA GGRSTSYELT G
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