Gene RSc3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3413 
Symbol 
ID1222277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3689968 
End bp3691083 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content68% 
IMG OID637239830 
Producthypothetical protein 
Protein accessionNP_521532 
Protein GI17548130 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCG GAGATTGGCT CTACATCTGG CAGGCGCCCG AATGGCCCGC CCTGCACTAC 
GACCTTGCAG CGCTGGCAGG CCCGCTGACG GAGGTTGCGC GTGCGCAAGG CCTTCTGCTG
GGCCGCCTGG CTGACGTCGG CATGGACATG CGCGACCAGG CCAGCCTTGC TGCCCTCACC
AACGACGTCC TCAAGACCAG CGAGATCGAA GGCGAACGGC TCGATGCCGA GTCGGTGCGT
TCGTCCATCG CCCGTCATCT GGGGGTCGAT ATCGGCGCAT TGGCCCCCGT GGACCGGCAC
GTGGAAGGCG TGGTCGAGAT GGTGTTGGAT GCCACGCTTC ACTGCGATGC GCCGGTCACG
GTCGAACGCC TGTTCGGCTG GCACGCCGCG CTCTTCCCCA TCGGCTACAG CGGCTTATCC
CGCTTGCGCG TGGGAGCCTG GCGCGATGAT GCCAAGGGCG CGATGCAGGT GATTTCCGGC
CCGATGCACC GGCCGCGCGT CCATGTCGAA GCGCCGCCCG CGGACCGGCT GGACGCGGAG
GTGGCCCGCT TGATCGACTG GGTCAACGCG CAGACCTCGG ACCCGCCCCT CCTCAAGGCC
GGTCTGGCGC ATCTGTGGTT CGTCACGCTG CATCCCTTCG ACGACGGCAA CGGCCGCATC
GCGCGCGCCC TCGGCGATCT GCTGCTGGCC CGGGCGGATG GCAGCCCGCA GCGGTTCTAC
AGCCTGTCCG CGCAGATTCA GCGCGAGCGG AAGGACTACT ACGACATGCT CGAACGGACC
CAGAAAGGCA CGCTCGACGT GACCGGCTGG CTGGCGTGGT TTCTCGGCGC GCTCCACCGG
GCCGTCGGGA GCGCCCAGCA TACGCTCGAC GCCGTCCTCG CCAAGACGCG CTTCTGGCAG
CGTTGGGCCG CCACGCCGAT GAACGGCCGG CAGGTCAAGC TGCTCAACCG CCTGCTCGAC
GGATTCGAGG GCAAGCTCAC CAGCAGCAAA TGGGCCGCGA TGGCCAAGTG TTCAGCGGAT
ACGGCGCTGC GGGATATCAA CGAACTGCTT GCGCTGGGCG TGCTGCGCAA GTCCGATGCG
GGCGGGCGCA GCACGTCCTA CGAACTGACG GGCTGA
 
Protein sequence
MKRGDWLYIW QAPEWPALHY DLAALAGPLT EVARAQGLLL GRLADVGMDM RDQASLAALT 
NDVLKTSEIE GERLDAESVR SSIARHLGVD IGALAPVDRH VEGVVEMVLD ATLHCDAPVT
VERLFGWHAA LFPIGYSGLS RLRVGAWRDD AKGAMQVISG PMHRPRVHVE APPADRLDAE
VARLIDWVNA QTSDPPLLKA GLAHLWFVTL HPFDDGNGRI ARALGDLLLA RADGSPQRFY
SLSAQIQRER KDYYDMLERT QKGTLDVTGW LAWFLGALHR AVGSAQHTLD AVLAKTRFWQ
RWAATPMNGR QVKLLNRLLD GFEGKLTSSK WAAMAKCSAD TALRDINELL ALGVLRKSDA
GGRSTSYELT G