Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1972 |
Symbol | |
ID | 6463025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2056106 |
End bp | 2057155 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642728173 |
Product | filamentation induced by cAMP protein Fic |
Protein accession | YP_002018803 |
Protein GI | 194337009 |
COG category | [S] Function unknown |
COG ID | [COG3177] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.335925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCGAA CCGACACTCT TCAAATTACC CCGGAGATCC TGAACCTGAT CGCTCAGATC GACGAGTTCA AAGGCGCTTG GCGTGCTTTA AGCACACTCG CTCCAGATCG CCTCTCAGCT TTACGCAGGG TCGCGACCAT TGAGAGTATT GGATCATCAA CTCGCATTGA GGGCAGCAAA CTCTCTGATC GAGAGGTAGA ACGTCTGCTT TCTAACCTAA AAATCAACTC TTTCGATACG CGTGATGAGC AAGAAGTTGC CGGTTATGCC GGGCTGATGG ACCTGGTGTT CGAATCGTGG CCGAGCATCC CGTTCAACGA GAACCACATC AAACAGTTAC ATCAAATCTT GCTGCACCAC AGTGAGAAAG ATGCCCGGCA CAGGGGGCAG TACAAAACCA ACTCCAACAG CGTCGCTGCC TTTGATGTAC ATGGCAAGCA GCTCGGTATC GTGTTCGAGA CAGCGACCCC CTTCGACACC GCTCGTCTCA TGGCCGAACT GGTGACTTGG GTGAAGGATG AACGTGAGTC TGCGCAACTG CACCCGCTGC TGATCATTGC TATCTTCGTG GTGCTCTTTC TCGGAATCCA TCCCTTCCAG GATGGTAACG GTCGGCTCAG TCGTGTGCTG ACCACCTTGC TGTTACTTCA GGCGGGGTAT GCCTACGTCC CGTACAGTTC ATTGGAAAGT GTTATCGAAC TCAACAAGGA AGCCTACTAT CTGGCACTGC GCTCTACCCA GGGGACGATC CGTACCGATG CGCCAAACTG GCAGCCATGG CTGGTGTTTT TCCTGCGTTC GCTCTCCGAT CAGGTAAACC GTCTTGAGAA AAAGGTTGCG CGAGAGAAGA TCGTTTTAGC CTCCTTGCCG GAACTCTCAC TCCAAATCGT CGAGTTTACC CGTGAACATG GGCGCATAAC AATAGGAGAT GCGATCAAAT TGACTGGCGG CAACCGCAAC ACCTTGAAGG GACATTTCCG AAACCTGGTC GAACGCGGTC ATCTTATTCG GCACGGCAGT GGGCGTGGTG TCTGGTACGA ACTGAGGTAG
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Protein sequence | MLRTDTLQIT PEILNLIAQI DEFKGAWRAL STLAPDRLSA LRRVATIESI GSSTRIEGSK LSDREVERLL SNLKINSFDT RDEQEVAGYA GLMDLVFESW PSIPFNENHI KQLHQILLHH SEKDARHRGQ YKTNSNSVAA FDVHGKQLGI VFETATPFDT ARLMAELVTW VKDERESAQL HPLLIIAIFV VLFLGIHPFQ DGNGRLSRVL TTLLLLQAGY AYVPYSSLES VIELNKEAYY LALRSTQGTI RTDAPNWQPW LVFFLRSLSD QVNRLEKKVA REKIVLASLP ELSLQIVEFT REHGRITIGD AIKLTGGNRN TLKGHFRNLV ERGHLIRHGS GRGVWYELR
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