Gene PsycPRwf_0723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0723 
Symbol 
ID5206648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp864730 
End bp865851 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content42% 
IMG OID640598944 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_001279627 
Protein GI148652534 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.43274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000454462 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACACG TTACTTATAT TCATGAACAC CCCAATTGGA CAGATTGGCA ATGGTCAGAT 
AAAAAACTGT TGCCGCTGGT AAGCCAAGTG CGATTGCTTC AAGGTCAGCT TCTCGGAAAA
TTGCTGACAC TAGGATTTGA TTTAAATGTT GAAGCTCAGT TAGACGCCGT TACTCTTGAA
ATCGTTAAAA CATCTGAGAT CGAAGGTGAA ATTTTAAAAA CAGATCAAGT AAGATCCTCT
GTTGCTCGGC ATTTAGGGGT TGATGACCAT AATATGCCTG CAGCCTCACG AGAAATTGAT
GCAGTGGTTG AGATGATGCT AGATGCAACA TTCCACTATC AAAAGCCCTT ATTGTTAGAA
GATTTGCTCG GTTGGCATCG AGCGCTGTTC CCAGAAGGCT ATAGCGGGCT TTATCGTATT
AAAGTTGGCA AGCTTCGGGA TGATAGTCAA GGCGCTATGC AAGTAGTTTC AGGAGGCTAT
GGCCGAGAGC GAGTGCATTT TGTTGCTCCT CATGCAGACA GGATTTTTGA TGAGTTGGAT
CTTTTTTTAC AGTGGCTTAA TATGCCGTCT AGCCAGCAAG ATAATTTAGA TTTGGTCATT
AAAGCGGGTA TCGCGCATTT ATGGTTTGTG ACGTTGCATC CTTTCGATGA TGGTAATGGA
CGGCTGACAA GAGCAATCAC GGAGCGAATG CTAGCAAAAA GTGATGGTAG CGCTCAGCGC
TTTTATAGTA TGTCCGCGCA AATTCTAAAT CGGCGCAATG ATTATTATAA GGTGTTGGAA
CGTACACAAA AAGGCGATCG CGATATTACT TTGTGGCTGG TTTGGTTTTT AGAAACGCTG
AAAGACGCTT TACTTGCAGC TCAAGCGACC ACCGATAAAA TTATGGATAA AGCCAACTTT
TGGCAGATGC ATCGACATCA TGCGTTAAAT GATAGACAGA TTAAGATGCT TAATAGTTTG
ATGAGTGACT TTTACGGCAA GTTGACCACT AAAAAATGGG CGACTATTAA TAAGTGCTCG
ATTGATACCG CACTTCGAGA TATCAATGAT TTGATAGAAA AAGGAATGTT AGAGAAGTCC
GCTGCTTCAG GGCGTAGTAC AAATTATGAG ATTGTTTTAT AA
 
Protein sequence
MKHVTYIHEH PNWTDWQWSD KKLLPLVSQV RLLQGQLLGK LLTLGFDLNV EAQLDAVTLE 
IVKTSEIEGE ILKTDQVRSS VARHLGVDDH NMPAASREID AVVEMMLDAT FHYQKPLLLE
DLLGWHRALF PEGYSGLYRI KVGKLRDDSQ GAMQVVSGGY GRERVHFVAP HADRIFDELD
LFLQWLNMPS SQQDNLDLVI KAGIAHLWFV TLHPFDDGNG RLTRAITERM LAKSDGSAQR
FYSMSAQILN RRNDYYKVLE RTQKGDRDIT LWLVWFLETL KDALLAAQAT TDKIMDKANF
WQMHRHHALN DRQIKMLNSL MSDFYGKLTT KKWATINKCS IDTALRDIND LIEKGMLEKS
AASGRSTNYE IVL