Gene Saro_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3922 
Symbol 
ID5077406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp92867 
End bp94006 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content64% 
IMG OID640481029 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_001165691 
Protein GI146275530 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.393872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTGGA ATTGGCAGCA GCCGGACTGG CCTGATTTTC GCTGGAATAG CGAAGCCCTG 
GCCGTGCACG AGGCCCGTTT CCTGCAGCAA TCCGGGATCA TGATCGGCGT GGTGAAGCAC
CTCGGCGATG AGGACCGCAC CAGCGTCGTG CTCGACGTCA TGACCGACGA AGCGATGAAG
ACCTCGCAGA TCGAAGGCGA ACTGCTCAAT CGCGACAGTG TCCAGTCTTC GCTGCGCCGC
GAGTTCGGTC TCGAAACCGA AGCCCGCCGG ATCCCGCCTG CCGAACGCGG CATCGCGGAA
ATGATGATGG CGCTCTTCCG GGACTTCGCC GCTCCACTGA CCGAAGAGGT CTTGGGCGAC
TGGCATCGCC TGGTCCTGAG TGGGCGCAGC GACATCGACG TCGTTGGCCG TTACCGTGAG
CACGAAGATG CGATGCAGGT CGTCTCGGGA GCCTTGCACA AGCCCACCGT CCATTTCGAG
GCACCACCGT CGCGCGAAAT GGCGGCGGAA ATGGCGCGGT TTCTCGAATG GTTCGCGGCT
ACCGGCCCTG GCGGCGCTAC GCCCCTACCC GGCCTAACCC GGTCTGGCCT CGCGCACCTC
TACTTCGTGA CCATTCACCC GTTCGAAGAC GGCAATGGCC GTATCGGGCG CGCGATCGCG
GAGAAGGCAC TGTCGCAGGC AATCGGGCAG CCAAGCCTGA TCGCGCTGTC GCAGACCATC
CAGCGGCGGC GCTCGGCCTA TTACGACGCA CTCGAAGCGG CGAACAAGTC CAACGAGATC
TCCGACTGGC TCGCCTATTG GGCTGAGACT GTCCTTGATG CGCAGACCCA CAGCCTGGCG
CTGATCGACT TCCTGCTGGA GAAGACCCGG TTCCACGACC GGTACCGGGG GAAGCTCAAC
CCGCGGCAGG AGAAGGTCAT TGCGCGCATG TTCCGTGAGG GGCTCGACGG GTTCAAGGGC
GGGCTCAGTG CTGCCAACTA CATCACGATC GCCGACACCT CGCGGGCCAC GGCAACCCGC
GATCTTCAGG AGCTGGTCGC GCTCGGCGCG ATGGGGCAAA CGGGAACGCT CAAGGCCACC
CGTTACCACC TGATCCTCGA TGCTGTTGCC GGGACAAACC CGCCGGTCAA TCAGGCGTAG
 
Protein sequence
MKWNWQQPDW PDFRWNSEAL AVHEARFLQQ SGIMIGVVKH LGDEDRTSVV LDVMTDEAMK 
TSQIEGELLN RDSVQSSLRR EFGLETEARR IPPAERGIAE MMMALFRDFA APLTEEVLGD
WHRLVLSGRS DIDVVGRYRE HEDAMQVVSG ALHKPTVHFE APPSREMAAE MARFLEWFAA
TGPGGATPLP GLTRSGLAHL YFVTIHPFED GNGRIGRAIA EKALSQAIGQ PSLIALSQTI
QRRRSAYYDA LEAANKSNEI SDWLAYWAET VLDAQTHSLA LIDFLLEKTR FHDRYRGKLN
PRQEKVIARM FREGLDGFKG GLSAANYITI ADTSRATATR DLQELVALGA MGQTGTLKAT
RYHLILDAVA GTNPPVNQA