Gene Sfri_3843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3843 
Symbol 
ID4280734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4587369 
End bp4588475 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content45% 
IMG OID638136664 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_752507 
Protein GI114564993 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGATTT GGCAACAACA AGAATGGCCT GACTTTGTAT GGGATCATAT CCGTATTAAT 
CCTTTATTGC GTCAAATTCA ATTTAACCAA GGTTTGTTAC TGGGTAAGAT AGGCACTGAA
TCTGTTAGTC AATGGACACT CGATACTATG ATCGCCAACA TCGTTCATTC AAGTGCGATA
GAAGGCGAAA CGCTCAACGC ATTGTCTGTA CGTTCATCTT TGGCCAATAA ACTTGGGGTG
AGCGAAGAAA ACCCTTATCC CACTACTGCA CAAACCGATG GTTTAGCTGA TATCACCTTA
GATGCGCTAC AAAACTGGCA ACAGCCACTT AGGCTAACGC GTATTTTAGA TTGGCATGCT
CTGTTGTTTC CGAGTAACCA AGCCGTGTTT AATCCTGTTA TTGGCGGTAA GTTACGCGGC
GATGAACCTA TGCAGGTGGT ATCGGGGCGT TTAGACAAAC CGACGATCCA TTTTGAAGCG
CCTCCTCGAG ATACGCTAGA CCAAAGTTTA ACGGAGTTTA TTGAGTGGTT TAATCAATCA
CGAAAACAGG CAGACCTTGA TCCGCTAGTA CGAGCAGCCA TCACTCATTT GTGGTTTGTC
ACCTTGCATC CGCTTGATGA TGGTAATGGA CGTATCACCC GTTTGCTCAC CGATTTAGCA
TTAGCGCAAG CTGAACATCG TTCGATTCAT TTTTATGCTA TGTCAGTTAG CATACTTGAG
CGACGTAAAG CTTATTACGC GATATTAGAG TCTACCCAAC AGGGCTCCCT TGATATTACA
CCTTGGCTAC TATGGTTTTT AGACACCTTA AATGATGCTG TTCAACACAC TCTCAATAAC
ATTGAACAAA CCATCGCGAA AACCCAATTC TGGCTTCGTG TCGATCGACG CTTACTCACC
CCAACATTAA CAACAGAACA AGTTAAGGTA CTTAACCGGC TGCTTGATGG CGATTTTAGT
GATGGGATCA GCAGTAGCCA ATATCAAAAA GTGGCTAAAG TCAGCCGCGC CACTGCCACC
CGACATTTGG CTCAACTAGT TGAACAACAA TGTTTGGTCA AAACCGGCGC GGGCGGTAGA
AGCACAAGGT ATGTGTTGGT GCGCTAA
 
Protein sequence
MWIWQQQEWP DFVWDHIRIN PLLRQIQFNQ GLLLGKIGTE SVSQWTLDTM IANIVHSSAI 
EGETLNALSV RSSLANKLGV SEENPYPTTA QTDGLADITL DALQNWQQPL RLTRILDWHA
LLFPSNQAVF NPVIGGKLRG DEPMQVVSGR LDKPTIHFEA PPRDTLDQSL TEFIEWFNQS
RKQADLDPLV RAAITHLWFV TLHPLDDGNG RITRLLTDLA LAQAEHRSIH FYAMSVSILE
RRKAYYAILE STQQGSLDIT PWLLWFLDTL NDAVQHTLNN IEQTIAKTQF WLRVDRRLLT
PTLTTEQVKV LNRLLDGDFS DGISSSQYQK VAKVSRATAT RHLAQLVEQQ CLVKTGAGGR
STRYVLVR