Gene Patl_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1889 
Symbol 
ID4172734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2285138 
End bp2286502 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content37% 
IMG OID638054898 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_661463 
Protein GI109898208 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCTT CTCCACCAAA AGAACTTATC AGTAACCCCT TGCAGCTCGC TTTGGAGAAG 
CACAGTGAGC ACCTGAAAGA ATATATCGAA CTTTTATCTC CTACCGATAA TAAAGGAAGG
TACCTTCACT ATGACCAGCT TCGGTATAGA TTTTCCAAAG ATTTAGATAA AGATTTAGCA
TGGTCAATTG TAAAAACTGC TAGATTGAGA CAATTAAAAA GAATTCTTCC TCTTGGTGAT
TCCAATGAAG TGGGGCGTTT TTTTCTGACT CCCAACATTC AAAAAGCCAT AAGTGAAACA
GACAGGAATA CAACAAGCGC TTCTCTCGAG TGGATGTGTT CAAAAATCGG TGAAGAAAAG
CACCTCGAAT ACTTATTAAA TGATTTGGTC GAAGATGAAG CAATAAGCAG CAGTCAACTC
GAAGGGGCTG CTACTACTAC TGAAGTTGCA AAAGACTTGT TGAAAAGGAA ACGAAAGCCT
AGAAGCTTAG ATGAAAAAAT GATCATCGGT AATTTCAAGA TGATGAATTT CGCATGGGAG
AATAGAGAAA AAGATCTAAC ACCTGATTTT ATTAGGGACT TACATCAAAT CGGCGTTGAT
GGGATTGACG ATGACAACTA CACACCCGGT GTGTTTCGGA AAACTGACGA TGTGAAAGTT
GTTAATGCTG AGGGTAATAT TGTTCATCAG CCGCCTTTAG CAGAAAACCT GAAAGCTCGT
TTGAAAAAAG TCTGTAGTTG GGTAAATAAA TGTCATCACG ATACAGATAA TCGTGACTAC
TTCCATCCAT TGGTAAAGGC AATCATAATT CATTTTCTCA TCGGTTTTGA GCATCCATTT
AGAGATGGAA ATGGGCGAGT TGCAAGGGCT CTTTTCTATT GGTATATGTT TAAAAATGAT
TTTTCTGCAT TTAGATACAT CACTATAAGT CTGCTATTGA AAAATGCACC TGTTCAATAC
GGGAAAAGTT ATCTTTATAC AGAATCAGAC GAAATGGATT TGACTTATTT CATTGATTAT
CAATGCTCAA TAATTATTAG AGCTATAAAC AAGTTTAAGG GTTCTTACCA ACGGACTCTA
AAAGAAGCTG AAGAGTTTAA TGTTTGGCTA TGGAAATCTG GTTTATATAA AAAATTATCT
GATAAACAGC AGAAAATATT CCAAGTAGCA CGGAGTGGTG TTGCTCATTT TTTTACGGCT
TCGAATGTTA AAGAAAACTT AGGATGTTCC TATAATACTG CATCTTCTGC ACTAAATGGC
CTTGTAGATA TGAAACTCTT CAAAAAGGAA AAACAAGGTC GTGAATGGGT TTTCAGCATG
GTAAGCCAAA AGAAAATCCT TAAAGATTGG AATGCGAAAA AATAG
 
Protein sequence
MIASPPKELI SNPLQLALEK HSEHLKEYIE LLSPTDNKGR YLHYDQLRYR FSKDLDKDLA 
WSIVKTARLR QLKRILPLGD SNEVGRFFLT PNIQKAISET DRNTTSASLE WMCSKIGEEK
HLEYLLNDLV EDEAISSSQL EGAATTTEVA KDLLKRKRKP RSLDEKMIIG NFKMMNFAWE
NREKDLTPDF IRDLHQIGVD GIDDDNYTPG VFRKTDDVKV VNAEGNIVHQ PPLAENLKAR
LKKVCSWVNK CHHDTDNRDY FHPLVKAIII HFLIGFEHPF RDGNGRVARA LFYWYMFKND
FSAFRYITIS LLLKNAPVQY GKSYLYTESD EMDLTYFIDY QCSIIIRAIN KFKGSYQRTL
KEAEEFNVWL WKSGLYKKLS DKQQKIFQVA RSGVAHFFTA SNVKENLGCS YNTASSALNG
LVDMKLFKKE KQGREWVFSM VSQKKILKDW NAKK