Gene Sala_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2616 
Symbol 
ID4081669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2756756 
End bp2757862 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content65% 
IMG OID638010993 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_617655 
Protein GI103488094 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTATA TCCACGAACT GCCGGACTGG CCGAACCTGC GCTGGAGCGA CCAGCAGCTT 
GCCCAGCCGC TCGCCGCCGT GCGCCACCGA CAGGGACGGT TGATCGGGCA CATGGAGGCG
CTTGGCTTCC CGCTGCGCGA GGAAGCCGTG CTTCAAGCAC TCACCGAGGA CGTTATCAAA
TCCAGCGAGA TCGAGGGCGA GGTGCTGGAC AGGGAGCAGG TGCGCTCCTC CATCGCCCGC
CGTCTCGGCA TGGACATCGG CGGTTTGGTG GAAGCGGATC GCAACGTCGA GGGCGTTGTC
GAAATGATGC TCGACGCCAC GCAGAACTAT GCGCAGCCCC TGACCGCCGA ACGGCTGTTC
GGCTGGCACG CGGCGCTGTT CCCCACCGGA CGCAGCGGCA TGAGCCGTAT CACCGTGGGC
GCATGGCGCA CCGCCGAAGC TGGCCCGATG CAGGTTGTCT CGGGGCCGAT TGGCCGCGAG
CGCGTCCACT ACGAAGCCCC TGCATCGGAG CGGCTCGACG CGGAAATGGC GCGTTTTCTC
GACTGGTTCG AGACGGCGGC ACCCGACCCC GTCCTGAAAG CCGGAATCGC GCACCTATGG
TTTGTCACCA TCCACCCCTT CGATGACGGC AACGGGCGCA TAGCGCGTGC CATCGCCGAC
CTTGCGCTGG CGCGCGCGGA GGGCACCGCA CAGCGTTTCT ACAGTATGTC CGCGCAAATC
CGGGTCGAGC GCAAAGCCTA TTACGATATG CTGGAGCGGG CGCAGAAGGG CGACTTGGAC
ATCACGCCCT GGCTGCTGTG GTTCATCGGC TGCCTTGATC GCGCCTTCGA CGGCGCTGAA
ACCATCCTCG CCAGCGTCAT GCGCAAGGCG CGGTTTTGGG AATCGGTCGC GGGCCAGCCC
TTGAACGAAC GCCAGCGCAA GGTCGTCAAC CGTCTGCTGG ACGGCTTCGA GGGCAAGCTT
ACCAATGCCA AATGGGCGGC GATCACCAAG GCATCGTCCG ATACCGCCCT GCGCGACATC
AACGATTTGC TCCGGCGCGG CATCCTTGAG AAGGAGCCGG CCGGTGGGCG CAGCACCAGC
TATTCACTGG TGCTGCCCGA GTCCTGA
 
Protein sequence
MVYIHELPDW PNLRWSDQQL AQPLAAVRHR QGRLIGHMEA LGFPLREEAV LQALTEDVIK 
SSEIEGEVLD REQVRSSIAR RLGMDIGGLV EADRNVEGVV EMMLDATQNY AQPLTAERLF
GWHAALFPTG RSGMSRITVG AWRTAEAGPM QVVSGPIGRE RVHYEAPASE RLDAEMARFL
DWFETAAPDP VLKAGIAHLW FVTIHPFDDG NGRIARAIAD LALARAEGTA QRFYSMSAQI
RVERKAYYDM LERAQKGDLD ITPWLLWFIG CLDRAFDGAE TILASVMRKA RFWESVAGQP
LNERQRKVVN RLLDGFEGKL TNAKWAAITK ASSDTALRDI NDLLRRGILE KEPAGGRSTS
YSLVLPES