Gene Slin_3797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3797 
Symbol 
ID8727555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4562316 
End bp4563431 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content44% 
IMG OID 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_003388591 
Protein GI284038661 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.117208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGA TTTGGCAATT GCCAAACTGG CCACTGTTCA CATTTGATAT AACAAAGTTT 
ACTCACTACG AGAGAGAATT CCATCGAAAT GTTGGGGTGA TCATAGGGTC GTTAGCGGCC
ATTTCTGACG CAGATATTGA CGAGTTACGG GTTACTTTAT TAAGTAATGA AGCGTTTGAT
ACCTCAAAAA TTGAAGGGGA GATTTTAGAC CGTGACTCTG TTCAGTCATC GATCCGCAAA
CAATTAGGCT TACAAACGGA TGGGAGAAGG GCGGGACCAA AAGAAACAGG TGTTGCTCAA
ATGATGGTAG ACGTAGTTCG AAGTTATCGT GACCCACTTG TCCAGGAACG CCTATTCTTG
TGGCATAAAA TGATCATGAA TGGCAGAATC GACCTGGAAA GGATTGGGGG CTATCGGACT
CATGCAGACC CGATGCAAAT CGTATCAGGC CGCTTAGATA TGCCAAAAGT ATATTATGAG
GCTCCTCCAT CTGATCGTGT GGAAAGGGAA ATGAATCAAT TCATCGATTG GTTCAATCGA
GCTGCTGAAG CGCAAATGCC AACGGTTGTT CATGCTGGTA TGGCCCATTT ATATTTTGAA
TTGATTCATC CTTTTGAGGA CGGCAATGGG CGAATAGGTC GTATCATTGC CGAAAAGGCA
TTAGCCATCG GTGCCAGACA ATCATTGATC ACCTCTTTAT CTAGTACGAT CGAGCGAGAC
AAAAAAGCCT ACTATCAGGC GTTAGAGCGG GCCAATACCT CTTTGGACAT CACAGAATGG
CTCATCTATT TTTCCGAAAA GATTCTGGAA GCCCAAGTTT ATGTTCAACG AATGATCGCC
TTTATTGTCT ATAAAGCTCG GTATTTCGAA ACCTTCAGTG GCCAGCTAAA TGATCGCCAG
ATCAAAGTAG CGTTACGTTT GTTTCAGGAA GGGTTAGAGG GCTTCAGGGG AGGCTTAAGT
GCAGAAAACT ACATTCGGAT CGCAAAAACG TCAAGAGCTA CGACTACCCG GGATTTGGCC
GAGATGGTTG AACTAGGCGC CCTGAAAAGG CATGGGAAGC TACGACACAC GCGTTATTAT
CTTCCGTTAC AGGAAGTAGC TGAAAAAGAA TCTTAA
 
Protein sequence
MKWIWQLPNW PLFTFDITKF THYEREFHRN VGVIIGSLAA ISDADIDELR VTLLSNEAFD 
TSKIEGEILD RDSVQSSIRK QLGLQTDGRR AGPKETGVAQ MMVDVVRSYR DPLVQERLFL
WHKMIMNGRI DLERIGGYRT HADPMQIVSG RLDMPKVYYE APPSDRVERE MNQFIDWFNR
AAEAQMPTVV HAGMAHLYFE LIHPFEDGNG RIGRIIAEKA LAIGARQSLI TSLSSTIERD
KKAYYQALER ANTSLDITEW LIYFSEKILE AQVYVQRMIA FIVYKARYFE TFSGQLNDRQ
IKVALRLFQE GLEGFRGGLS AENYIRIAKT SRATTTRDLA EMVELGALKR HGKLRHTRYY
LPLQEVAEKE S