Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7373 |
Symbol | |
ID | 7380413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 347511 |
End bp | 348617 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643641441 |
Product | hypothetical protein |
Protein accession | YP_002539738 |
Protein GI | 222102699 |
COG category | [S] Function unknown |
COG ID | [COG3177] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.269183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATGGA ACTGGCAACT GCCCGATTGG CCAAACTTCT CCTATGACAT TGAGAACATG GCCCCTTTGG AGCAAAGGTT TCTCCAGTCA TCCGGTGAGG TTATCGGTGC TGTCAGGCAT TTCAGTGACG ACGACAGCAA CCAATTGCGG ATTGAGTTGC TGAGCGACGA AGCCATTAAA ACGTCGGAGA TCGAAGGCGA GTTCCTTGAT CGAGCAAGCG TACAGTCGTC GCTGCGCCGA CAATTTGGTC TCAATACAGA CAATCGTCCG GTCCGACCAC AAGAACGTGG GATCGCAGAG ATGATGGCCG ACGTCTATAA AAATTGGTCC GGCCCACTCC AGCATGAGGA CCTTTTCCGT TGGCACTCGA TGCTGATGGC GGGAACCCGA TATATCGAAA CAATTTGCGC CTACCGACGC CATAATGATG CAATGCAGAT CGTCTCAGGT CGCCTGGACA AGCCTATAAT CCATTTTGAG GCACCGCCAT CCAGCCAGGT GGCTGCGGAA ATGGCGCTTT TCATCGACTG GTTCAATCGG TCGGGGCCAG GCGGGTCAGT TCCATTATCT GCGCTGACCC GCGCAGCCAT CGGACACCTC TATTTCGAAA GCATCCATCC CTTTGAGGAC GGTAACGGTA GAATTGGACG CGCGTTAGCT GAAAAATCGC TAGCACAGAA CATTGGGCAA CCAAGTCTGA TTTCGCTTGC CTTTACAATT GAGCGTGACC GAAAGGCCTA TTACTGCGAA CTTGAACGCC ATCAGCGAAA GCTCGATATC ACCGGATGGA TTGTCTATTT TTCGCAGACA ATCCTGGATG CCCAACAGGC GACGATTGAT CGCATTGCCT TCTTCATTCA AAAGGCAAAA TTCTACGATC GGTTTCGGGA CCGGCTTAAT GAACGCCAGG AAAAAGTCAT CGCCCGTATT TTTCGAGAGG GTATTGCTGG TTTTAAAGGC GGGTTGAGCG CGGAAAATTA CATTTCAATC ACGGCCACAT CGCGTGCGAC AGCAACGCGT GACCTCCAGC ACCTTGTCGA GATCGGCGCA TTCACGCGCA CCGGAGAGCG GCGACACACG CGGTACACCC TAACACTCCA AAGCTGA
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Protein sequence | MQWNWQLPDW PNFSYDIENM APLEQRFLQS SGEVIGAVRH FSDDDSNQLR IELLSDEAIK TSEIEGEFLD RASVQSSLRR QFGLNTDNRP VRPQERGIAE MMADVYKNWS GPLQHEDLFR WHSMLMAGTR YIETICAYRR HNDAMQIVSG RLDKPIIHFE APPSSQVAAE MALFIDWFNR SGPGGSVPLS ALTRAAIGHL YFESIHPFED GNGRIGRALA EKSLAQNIGQ PSLISLAFTI ERDRKAYYCE LERHQRKLDI TGWIVYFSQT ILDAQQATID RIAFFIQKAK FYDRFRDRLN ERQEKVIARI FREGIAGFKG GLSAENYISI TATSRATATR DLQHLVEIGA FTRTGERRHT RYTLTLQS
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