More than 300 homologs were found in PanDaTox collection
for query gene Rmet_5133 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007348  Reut_B5308  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  87.11 
 
 
391 aa  696    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B2484  Acyl-CoA dehydrogenase  81.59 
 
 
395 aa  648    Burkholderia sp. 383  Bacteria  normal  normal  0.959704 
 
 
-
 
NC_007974  Rmet_5133  acyl-CoA dehydrogenase  100 
 
 
391 aa  806    Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_5941  acyl-CoA dehydrogenase domain-containing protein  81.07 
 
 
394 aa  665    Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0480348 
 
 
-
 
NC_010515  Bcenmc03_3889  acyl-CoA dehydrogenase domain-containing protein  80.05 
 
 
395 aa  638    Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0927975  normal  0.409924 
 
 
-
 
NC_010501  PputW619_3157  acyl-CoA dehydrogenase domain-containing protein  54.16 
 
 
387 aa  420  1e-116  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2039  acyl-CoA dehydrogenase, putative  53.35 
 
 
388 aa  402  1e-111  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3703  acyl-CoA dehydrogenase domain-containing protein  53.08 
 
 
388 aa  400  9.999999999999999e-111  Pseudomonas putida F1  Bacteria  decreased coverage  0.0000394656  normal 
 
 
-
 
NC_009439  Pmen_1723  acyl-CoA dehydrogenase domain-containing protein  51.61 
 
 
387 aa  392  1e-108  Pseudomonas mendocina ymp  Bacteria  normal  0.0429936  normal  0.192279 
 
 
-
 
NC_010002  Daci_3610  acyl-CoA dehydrogenase domain-containing protein  49.34 
 
 
407 aa  365  1e-100  Delftia acidovorans SPH-1  Bacteria  normal  0.053028  normal  0.0314589 
 
 
-
 
NC_014210  Ndas_1096  acyl-CoA dehydrogenase domain protein  43.56 
 
 
393 aa  328  1.0000000000000001e-88  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.667502 
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  37.4 
 
 
388 aa  245  8e-64  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  36.88 
 
 
388 aa  239  5e-62  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  38.21 
 
 
382 aa  238  1e-61  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_009656  PSPA7_5712  putative acyl-CoA dehydrogenase  37.99 
 
 
386 aa  232  1e-59  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_65820  putative acyl-CoA dehydrogenase  37.99 
 
 
386 aa  231  1e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1999  acyl-CoA dehydrogenase  37.34 
 
 
391 aa  229  9e-59  Thermobifida fusca YX  Bacteria  normal  0.0248728  n/a   
 
 
-
 
NC_013159  Svir_33210  acyl-CoA dehydrogenase  35.88 
 
 
389 aa  228  1e-58  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.243663  normal  0.754036 
 
 
-
 
NC_010322  PputGB1_2181  acyl-CoA dehydrogenase domain-containing protein  37.47 
 
 
386 aa  227  3e-58  Pseudomonas putida GB-1  Bacteria  normal  0.326272  normal 
 
 
-
 
NC_009512  Pput_2038  acyl-CoA dehydrogenase domain-containing protein  37.47 
 
 
386 aa  226  5.0000000000000005e-58  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3725  acyl-CoA dehydrogenase domain-containing protein  37.47 
 
 
386 aa  225  1e-57  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1118  acyl-CoA dehydrogenase domain protein  36.98 
 
 
391 aa  224  2e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.549204 
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  37.34 
 
 
384 aa  223  3e-57  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_008044  TM1040_2796  butyryl-CoA dehydrogenase  35.9 
 
 
399 aa  223  3e-57  Ruegeria sp. TM1040  Bacteria  normal  normal  0.262809 
 
 
-
 
NC_013093  Amir_1569  acyl-CoA dehydrogenase domain protein  37.14 
 
 
389 aa  223  4.9999999999999996e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.881248  n/a   
 
 
-
 
NC_013411  GYMC61_2494  Butyryl-CoA dehydrogenase  34.26 
 
 
392 aa  222  8e-57  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_004311  BRA1088  acyl-CoA dehydrogenase  37.82 
 
 
380 aa  221  1.9999999999999999e-56  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  35.09 
 
 
386 aa  221  1.9999999999999999e-56  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  35.01 
 
 
383 aa  219  5e-56  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  35.56 
 
 
378 aa  218  1e-55  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  35.9 
 
 
398 aa  217  2e-55  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2710  acyl-CoA dehydrogenase domain-containing protein  36.01 
 
 
395 aa  217  2.9999999999999998e-55  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2382  acyl-CoA dehydrogenase domain protein  34.52 
 
 
389 aa  217  2.9999999999999998e-55  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  34.37 
 
 
384 aa  217  4e-55  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  35.47 
 
 
388 aa  216  4e-55  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  35.66 
 
 
380 aa  216  5.9999999999999996e-55  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  36.75 
 
 
383 aa  216  5.9999999999999996e-55  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_013922  Nmag_3108  acyl-CoA dehydrogenase domain protein  33.78 
 
 
383 aa  216  7e-55  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_007794  Saro_1224  acyl-CoA dehydrogenase-like  35.9 
 
 
394 aa  215  9e-55  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0161366  n/a   
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  35.39 
 
 
377 aa  214  2.9999999999999995e-54  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1232  acyl-CoA dehydrogenase domain protein  34.68 
 
 
381 aa  213  2.9999999999999995e-54  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  34.73 
 
 
385 aa  213  5.999999999999999e-54  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  34.57 
 
 
384 aa  212  9e-54  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  36.1 
 
 
395 aa  212  9e-54  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0081  acyl-CoA dehydrogenase domain protein  32.81 
 
 
642 aa  212  9e-54  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  34.73 
 
 
385 aa  212  9e-54  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  34.57 
 
 
384 aa  212  1e-53  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  34.88 
 
 
385 aa  211  2e-53  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  36.53 
 
 
382 aa  211  2e-53  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_013743  Htur_0919  acyl-CoA dehydrogenase domain protein  33.51 
 
 
383 aa  211  3e-53  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_1327  acyl-CoA dehydrogenase domain protein  33.59 
 
 
399 aa  210  4e-53  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010524  Lcho_1213  acyl-CoA dehydrogenase domain-containing protein  34.55 
 
 
386 aa  209  5e-53  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  34.93 
 
 
380 aa  209  8e-53  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4539  acyl-CoA dehydrogenase domain protein  37.73 
 
 
385 aa  209  8e-53  Ralstonia pickettii 12J  Bacteria  normal  0.452852  normal  0.739278 
 
 
-
 
NC_012857  Rpic12D_3467  acyl-CoA dehydrogenase domain protein  37.73 
 
 
385 aa  209  8e-53  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0842785 
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  34.75 
 
 
376 aa  208  1e-52  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_013922  Nmag_2307  acyl-CoA dehydrogenase domain protein  33.33 
 
 
381 aa  208  1e-52  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  34.27 
 
 
386 aa  208  2e-52  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2701  acyl-CoA dehydrogenase domain-containing protein  34.27 
 
 
386 aa  207  2e-52  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.47386  normal 
 
 
-
 
NC_007974  Rmet_5908  acyl-CoA dehydrogenase-like protein  36.75 
 
 
385 aa  208  2e-52  Cupriavidus metallidurans CH34  Bacteria  normal  0.276142  normal 
 
 
-
 
NC_008025  Dgeo_0736  acyl-CoA dehydrogenase-like protein  33.85 
 
 
379 aa  207  2e-52  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.763418 
 
 
-
 
NC_008786  Veis_2500  isovaleryl-CoA dehydrogenase  34.85 
 
 
388 aa  208  2e-52  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.353952  normal 
 
 
-
 
NC_007348  Reut_B5319  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  36.48 
 
 
385 aa  207  3e-52  Ralstonia eutropha JMP134  Bacteria  normal  0.398534  n/a   
 
 
-
 
NC_009636  Smed_2175  acyl-CoA dehydrogenase domain-containing protein  33.51 
 
 
386 aa  206  5e-52  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  36.7 
 
 
386 aa  206  5e-52  Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  35.16 
 
 
380 aa  206  6e-52  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  32.54 
 
 
400 aa  206  8e-52  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_009921  Franean1_3930  acyl-CoA dehydrogenase domain-containing protein  36.11 
 
 
385 aa  205  9e-52  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0411302 
 
 
-
 
NC_010524  Lcho_0847  acyl-CoA dehydrogenase domain-containing protein  35.36 
 
 
386 aa  205  9e-52  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009675  Anae109_2136  acyl-CoA dehydrogenase domain-containing protein  36.27 
 
 
380 aa  205  1e-51  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.281355 
 
 
-
 
NC_012793  GWCH70_0441  acyl-CoA dehydrogenase domain protein  33.68 
 
 
401 aa  205  1e-51  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0410  acyl-CoA dehydrogenase domain protein  36.39 
 
 
389 aa  205  1e-51  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.436291 
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  33.69 
 
 
376 aa  204  2e-51  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_008048  Sala_3010  acyl-CoA dehydrogenase-like protein  35.37 
 
 
387 aa  204  2e-51  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.157219 
 
 
-
 
NC_013739  Cwoe_1590  acyl-CoA dehydrogenase domain protein  33.42 
 
 
396 aa  204  2e-51  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.663907 
 
 
-
 
NC_013743  Htur_2326  acyl-CoA dehydrogenase domain protein  33.76 
 
 
398 aa  203  4e-51  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011368  Rleg2_4494  acyl-CoA dehydrogenase domain protein  33.86 
 
 
386 aa  203  5e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.211283  normal 
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  35.58 
 
 
384 aa  203  5e-51  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  32.99 
 
 
379 aa  202  7e-51  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_008752  Aave_4365  acyl-CoA dehydrogenase domain-containing protein  34.58 
 
 
376 aa  202  7e-51  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  30.5 
 
 
402 aa  202  8e-51  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_010002  Daci_5985  acyl-CoA dehydrogenase domain-containing protein  33.42 
 
 
376 aa  202  9e-51  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00997774 
 
 
-
 
NC_007348  Reut_B4154  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  35.5 
 
 
410 aa  201  1.9999999999999998e-50  Ralstonia eutropha JMP134  Bacteria  normal  0.328631  n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  33.07 
 
 
379 aa  201  1.9999999999999998e-50  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  35.06 
 
 
384 aa  201  1.9999999999999998e-50  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  33.86 
 
 
376 aa  200  3e-50  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS01762  putative acyl-CoA dehydrogenase oxidoreductase protein  37.47 
 
 
385 aa  200  3e-50  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.272038 
 
 
-
 
NC_013922  Nmag_3415  acyl-CoA dehydrogenase domain protein  33.09 
 
 
414 aa  200  3e-50  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009077  Mjls_4077  acyl-CoA dehydrogenase domain-containing protein  33.25 
 
 
388 aa  200  3.9999999999999996e-50  Mycobacterium sp. JLS  Bacteria  normal  normal  0.226769 
 
 
-
 
NC_013216  Dtox_1697  acyl-CoA dehydrogenase domain protein  33.51 
 
 
386 aa  199  6e-50  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0868604  normal 
 
 
-
 
NC_013510  Tcur_4367  acyl-CoA dehydrogenase domain protein  36.15 
 
 
418 aa  199  7e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3822  acyl-CoA dehydrogenase-like  32.37 
 
 
386 aa  198  1.0000000000000001e-49  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1556  acyl-CoA dehydrogenase domain-containing protein  35.38 
 
 
386 aa  198  1.0000000000000001e-49  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3774  acyl-CoA dehydrogenase domain-containing protein  33.16 
 
 
376 aa  198  2.0000000000000003e-49  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  33.33 
 
 
377 aa  197  2.0000000000000003e-49  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_008781  Pnap_2129  Acyl-CoA dehydrogenase  34.12 
 
 
386 aa  197  2.0000000000000003e-49  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0260778 
 
 
-
 
NC_014212  Mesil_0298  acyl-CoA dehydrogenase domain protein  35.12 
 
 
381 aa  197  2.0000000000000003e-49  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_0505  acyl-CoA dehydrogenase domain protein  32.55 
 
 
561 aa  197  2.0000000000000003e-49  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0140  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  35.03 
 
 
376 aa  197  3e-49  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1816  acyl-CoA dehydrogenase-like protein  32.11 
 
 
429 aa  197  3e-49  Cupriavidus metallidurans CH34  Bacteria  normal  0.0196409  hitchhiker  0.006326 
 
 
-
 
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