More than 300 homologs were found in PanDaTox collection
for query gene Bamb_5941 on replicon NC_008392
Organism: Burkholderia ambifaria AMMD



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007348  Reut_B5308  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  80.82 
 
 
391 aa  653    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5133  acyl-CoA dehydrogenase  81.07 
 
 
391 aa  665    Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_5941  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
394 aa  816    Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0480348 
 
 
-
 
NC_007511  Bcep18194_B2484  Acyl-CoA dehydrogenase  79.33 
 
 
395 aa  627  1e-178  Burkholderia sp. 383  Bacteria  normal  normal  0.959704 
 
 
-
 
NC_010515  Bcenmc03_3889  acyl-CoA dehydrogenase domain-containing protein  78.55 
 
 
395 aa  625  1e-178  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0927975  normal  0.409924 
 
 
-
 
NC_010501  PputW619_3157  acyl-CoA dehydrogenase domain-containing protein  51.88 
 
 
387 aa  392  1e-108  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1723  acyl-CoA dehydrogenase domain-containing protein  51.47 
 
 
387 aa  387  1e-106  Pseudomonas mendocina ymp  Bacteria  normal  0.0429936  normal  0.192279 
 
 
-
 
NC_002947  PP_2039  acyl-CoA dehydrogenase, putative  51.61 
 
 
388 aa  384  1e-105  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3703  acyl-CoA dehydrogenase domain-containing protein  51.34 
 
 
388 aa  380  1e-104  Pseudomonas putida F1  Bacteria  decreased coverage  0.0000394656  normal 
 
 
-
 
NC_010002  Daci_3610  acyl-CoA dehydrogenase domain-containing protein  47.33 
 
 
407 aa  350  2e-95  Delftia acidovorans SPH-1  Bacteria  normal  0.053028  normal  0.0314589 
 
 
-
 
NC_014210  Ndas_1096  acyl-CoA dehydrogenase domain protein  43.88 
 
 
393 aa  323  4e-87  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.667502 
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  36.15 
 
 
388 aa  238  1e-61  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_009656  PSPA7_5712  putative acyl-CoA dehydrogenase  36.91 
 
 
386 aa  234  3e-60  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_65820  putative acyl-CoA dehydrogenase  36.91 
 
 
386 aa  234  3e-60  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_3108  acyl-CoA dehydrogenase domain protein  34.3 
 
 
383 aa  232  7.000000000000001e-60  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  35.64 
 
 
388 aa  232  7.000000000000001e-60  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_013159  Svir_33210  acyl-CoA dehydrogenase  34.75 
 
 
389 aa  231  2e-59  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.243663  normal  0.754036 
 
 
-
 
NC_013093  Amir_1569  acyl-CoA dehydrogenase domain protein  36.01 
 
 
389 aa  231  2e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  0.881248  n/a   
 
 
-
 
NC_009512  Pput_2038  acyl-CoA dehydrogenase domain-containing protein  36.24 
 
 
386 aa  231  2e-59  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2181  acyl-CoA dehydrogenase domain-containing protein  36.24 
 
 
386 aa  231  2e-59  Pseudomonas putida GB-1  Bacteria  normal  0.326272  normal 
 
 
-
 
NC_007333  Tfu_1999  acyl-CoA dehydrogenase  35.43 
 
 
391 aa  230  3e-59  Thermobifida fusca YX  Bacteria  normal  0.0248728  n/a   
 
 
-
 
NC_002947  PP_3725  acyl-CoA dehydrogenase domain-containing protein  36.24 
 
 
386 aa  229  5e-59  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_0919  acyl-CoA dehydrogenase domain protein  33.51 
 
 
383 aa  227  2e-58  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_014210  Ndas_1118  acyl-CoA dehydrogenase domain protein  35.75 
 
 
391 aa  227  2e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.549204 
 
 
-
 
NC_013411  GYMC61_2494  Butyryl-CoA dehydrogenase  32.98 
 
 
392 aa  225  9e-58  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  36.7 
 
 
382 aa  223  4.9999999999999996e-57  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  34.75 
 
 
386 aa  222  9.999999999999999e-57  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008044  TM1040_2796  butyryl-CoA dehydrogenase  33.69 
 
 
399 aa  221  9.999999999999999e-57  Ruegeria sp. TM1040  Bacteria  normal  normal  0.262809 
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  35.9 
 
 
378 aa  219  3.9999999999999997e-56  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  34.03 
 
 
384 aa  219  6e-56  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  35.34 
 
 
384 aa  219  6e-56  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  35.08 
 
 
384 aa  219  7e-56  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  36.44 
 
 
376 aa  219  8.999999999999998e-56  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_013739  Cwoe_1590  acyl-CoA dehydrogenase domain protein  33.77 
 
 
396 aa  218  1e-55  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.663907 
 
 
-
 
NC_008025  Dgeo_0736  acyl-CoA dehydrogenase-like protein  34.85 
 
 
379 aa  218  1e-55  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.763418 
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  34.04 
 
 
380 aa  218  2e-55  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  35.73 
 
 
398 aa  217  2e-55  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  35.9 
 
 
376 aa  217  4e-55  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  33.51 
 
 
380 aa  216  7e-55  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  35.64 
 
 
384 aa  215  9e-55  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_012029  Hlac_1318  acyl-CoA dehydrogenase domain protein  33.68 
 
 
384 aa  215  9.999999999999999e-55  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal  0.0793911 
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  34.4 
 
 
388 aa  215  9.999999999999999e-55  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  31.13 
 
 
402 aa  212  9e-54  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  34.44 
 
 
380 aa  211  2e-53  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  34.31 
 
 
383 aa  211  2e-53  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_0081  acyl-CoA dehydrogenase domain protein  33.51 
 
 
642 aa  211  2e-53  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2701  acyl-CoA dehydrogenase domain-containing protein  34.13 
 
 
386 aa  211  2e-53  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.47386  normal 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  30.34 
 
 
379 aa  210  3e-53  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA1088  acyl-CoA dehydrogenase  36.48 
 
 
380 aa  210  4e-53  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_2068  acyl-CoA dehydrogenase domain protein  33.07 
 
 
385 aa  210  4e-53  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_011831  Cagg_2382  acyl-CoA dehydrogenase domain protein  34.13 
 
 
389 aa  210  4e-53  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  32.39 
 
 
400 aa  210  4e-53  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  33.07 
 
 
377 aa  209  6e-53  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_009636  Smed_2175  acyl-CoA dehydrogenase domain-containing protein  33.33 
 
 
386 aa  209  8e-53  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1232  acyl-CoA dehydrogenase domain protein  33.8 
 
 
381 aa  209  9e-53  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  32.56 
 
 
379 aa  208  1e-52  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  30.08 
 
 
379 aa  208  1e-52  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  34.84 
 
 
386 aa  208  1e-52  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4077  acyl-CoA dehydrogenase domain-containing protein  32.8 
 
 
388 aa  208  1e-52  Mycobacterium sp. JLS  Bacteria  normal  normal  0.226769 
 
 
-
 
NC_007794  Saro_1224  acyl-CoA dehydrogenase-like  33.94 
 
 
394 aa  207  2e-52  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0161366  n/a   
 
 
-
 
NC_009921  Franean1_2710  acyl-CoA dehydrogenase domain-containing protein  36.6 
 
 
395 aa  207  2e-52  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  30.87 
 
 
379 aa  207  3e-52  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  32.98 
 
 
377 aa  207  3e-52  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4494  acyl-CoA dehydrogenase domain protein  33.33 
 
 
386 aa  207  3e-52  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.211283  normal 
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  33.68 
 
 
385 aa  207  3e-52  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_009438  Sputcn32_1399  acyl-CoA dehydrogenase domain-containing protein  36.05 
 
 
385 aa  207  3e-52  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  33.33 
 
 
385 aa  206  4e-52  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0410  acyl-CoA dehydrogenase domain protein  33.51 
 
 
389 aa  206  5e-52  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.436291 
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  33.33 
 
 
385 aa  206  6e-52  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  34.22 
 
 
395 aa  204  1e-51  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  33.6 
 
 
376 aa  205  1e-51  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  33.6 
 
 
375 aa  204  2e-51  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_008782  Ajs_3774  acyl-CoA dehydrogenase domain-containing protein  33.51 
 
 
376 aa  204  2e-51  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1527  acyl-CoA dehydrogenase domain-containing protein  35.79 
 
 
385 aa  204  2e-51  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5985  acyl-CoA dehydrogenase domain-containing protein  33.51 
 
 
376 aa  204  2e-51  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00997774 
 
 
-
 
NC_009675  Anae109_2136  acyl-CoA dehydrogenase domain-containing protein  33.42 
 
 
380 aa  204  2e-51  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.281355 
 
 
-
 
NC_007973  Rmet_0108  acyl-CoA dehydrogenase-like protein  35.11 
 
 
376 aa  204  2e-51  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1491  acyl-CoA dehydrogenase domain-containing protein  35.79 
 
 
385 aa  204  2e-51  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_3052  acyl-CoA dehydrogenase domain protein  33.51 
 
 
376 aa  204  3e-51  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0140  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  35.11 
 
 
376 aa  204  3e-51  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  34.38 
 
 
382 aa  204  3e-51  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  34.39 
 
 
383 aa  204  3e-51  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  34.84 
 
 
384 aa  204  3e-51  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_007348  Reut_B4154  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  36.36 
 
 
410 aa  203  4e-51  Ralstonia eutropha JMP134  Bacteria  normal  0.328631  n/a   
 
 
-
 
NC_007492  Pfl01_2867  Acyl-CoA dehydrogenase-like  34.04 
 
 
375 aa  203  4e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.967944  normal  0.115681 
 
 
-
 
NC_013743  Htur_2326  acyl-CoA dehydrogenase domain protein  31.85 
 
 
398 aa  203  4e-51  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_2854  acyl-CoA dehydrogenase domain protein  35.79 
 
 
385 aa  203  4e-51  Shewanella baltica OS223  Bacteria  normal  0.715109  hitchhiker  0.0000000460252 
 
 
-
 
NC_009052  Sbal_1497  acyl-CoA dehydrogenase domain-containing protein  35.79 
 
 
385 aa  203  4e-51  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0124  acyl-CoA dehydrogenase domain protein  35.9 
 
 
376 aa  202  7e-51  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4185  acyl-CoA dehydrogenase-like  33.51 
 
 
376 aa  202  7e-51  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1165  acyl-CoA dehydrogenase domain-containing protein  34.1 
 
 
389 aa  202  7e-51  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_3010  acyl-CoA dehydrogenase-like protein  33.68 
 
 
387 aa  202  9e-51  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.157219 
 
 
-
 
NC_008752  Aave_4365  acyl-CoA dehydrogenase domain-containing protein  33.6 
 
 
376 aa  202  9e-51  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0268  butyryl-CoA dehydrogenase  32.54 
 
 
379 aa  202  9.999999999999999e-51  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2769  acyl-CoA dehydrogenase domain-containing protein  35.26 
 
 
385 aa  201  9.999999999999999e-51  Shewanella sp. ANA-3  Bacteria  normal  normal  0.329604 
 
 
-
 
NC_010524  Lcho_1213  acyl-CoA dehydrogenase domain-containing protein  34.29 
 
 
386 aa  202  9.999999999999999e-51  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_004347  SO_1679  acyl-CoA dehydrogenase family protein  35.26 
 
 
385 aa  201  1.9999999999999998e-50  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012857  Rpic12D_3467  acyl-CoA dehydrogenase domain protein  34.54 
 
 
385 aa  201  1.9999999999999998e-50  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0842785 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  32.27 
 
 
379 aa  201  1.9999999999999998e-50  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_013411  GYMC61_1327  acyl-CoA dehydrogenase domain protein  33.51 
 
 
399 aa  201  1.9999999999999998e-50  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
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