Gene Shewana3_2769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2769 
Symbol 
ID4479413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3307341 
End bp3308498 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content53% 
IMG OID639727375 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_870402 
Protein GI117921210 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.329604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTA ATTTCAACGA AGACCAACGC CAATTTGCCG ATCTGGCCCG CCAGTTCGCG 
GCGGATGAAC TCGCCCCCTT CGCCGCCAAA TGGGACGAAG AACATCATTT CCCTAAGGAT
GTGATCCAAA AAGCCGGTGA GCTGGGTTTC TGCTCCCTGT ATTCCCCCGA ATCGGAAGGT
GGCATGGGCC TGTCGCGTTT AGATGCCTCG ATTATTTTCG AAGAGCTATC GAAAGGCTGT
ACAGCCACAA CAGCCATGCT GACGATTCAC AATATGGCCA CTTGGATGGT TACCACTTGG
GGCACAGATA CGCTGCGTCA AGCTTGGTCT GAGCCCTTGA CCACGGGCCA AATGCTGGCG
TCTTACTGCT TAACTGAACC AGGTGCGGGC TCTGATGCGG CATCACTGCA AACCAAAGCG
GTGCGTGAGG GTGATGAATA TGTGGTATCT GGCTCTAAGA TGTTTATCTC GGGCGCAGGT
TCAACTGAGC TTTTAGTCGT AATGTGCCGC ACTGGCCAAG CTGGGCCAAA GGGGATTTCG
GCGATTGCCA TTCCTGCCGA CAGTGAAGGT ATTATCTATG GCAAGGCCGA AGATAAGATG
GGTTGGAACG CGCAGCCGAC GCGCTTAGTT ACCTTCGATA ACGTGCGTGT ACCCGTTGCG
AACCTGCTCG GTGAAGAAGG CCAAGGTTTT ACCTTTGCGA TGAAAGGTTT AGACGGTGGT
CGTATCAATA TCGCCACTTG CTCTGTCGGT ACGGCGCAGG CGGCTTTGGA GCGTGCGACT
CAGTACATGA ATGAACGTCA GCAATTTGGT AAGCCGCTGG CAGCCTTCCA AGCGCTGCAA
TTTAAGCTCG CCGATATGGC GACCGAATTA GTGGCCGCGC GTCAAATGGT GCGTCTGGCC
GCCTTTAAAC TCGACAGTGG CGACCCAGAA GCGACCGCCT ATTGCGCGAT GGCGAAGCGT
TTTGCCACCG ATGTGGGCTT CCAAGTTTGT GATGCCGCGC TGCAAATTCA TGGCGGATAT
GGTTATATCA GGGAGTACCC CTTAGAGCGT CACTTCCGTG ATGTTCGCGT ACATCAGATT
TTAGAGGGCA CTAACGAGAT TATGCGCCTC ATTATCGCCC GTCGTTTACT CGACGAAAAT
GCCGGACAAA TCCTCTAA
 
Protein sequence
MDFNFNEDQR QFADLARQFA ADELAPFAAK WDEEHHFPKD VIQKAGELGF CSLYSPESEG 
GMGLSRLDAS IIFEELSKGC TATTAMLTIH NMATWMVTTW GTDTLRQAWS EPLTTGQMLA
SYCLTEPGAG SDAASLQTKA VREGDEYVVS GSKMFISGAG STELLVVMCR TGQAGPKGIS
AIAIPADSEG IIYGKAEDKM GWNAQPTRLV TFDNVRVPVA NLLGEEGQGF TFAMKGLDGG
RINIATCSVG TAQAALERAT QYMNERQQFG KPLAAFQALQ FKLADMATEL VAARQMVRLA
AFKLDSGDPE ATAYCAMAKR FATDVGFQVC DAALQIHGGY GYIREYPLER HFRDVRVHQI
LEGTNEIMRL IIARRLLDEN AGQIL