Gene Bcenmc03_3889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3889 
Symbol 
ID6126722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp813061 
End bp814248 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content69% 
IMG OID641650997 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001777530 
Protein GI170736270 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0927975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.409924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGATC ATCTGCAACG CCCCGAATTC GTCGCGCTGC GCGCAGCCGT GCTGCGCTTC 
GTCGACGACG AACTGCGCCC GATCGAGCGC GAGCTCGGGC TCGACTCGGA AGACGTGTGG
CCGCGCGACG TGCTGCGCCG CGTGTGGCAA CGCTCGGCCG CGCTCGGCTT CTATACCGCG
AGCCTGCCCG TCGAGATCGG CGGCCAGGGG CTGTCGATCG CCGAGGTGTG CGCGCTGAAG
GCCGACCTGG CCGCTTGCGG CGCGGCGCTC GCGCCGCACG TGCTCGGCGA ACTCGGCGGG
CCGCCGCGTA TCGGCAACAT GCTGAAGTAC GCGACCACCG CGCAACTCGA CCGCTATTTC
CGGCCGGTGA TGCGCGGCGA GAAATCGACG TGCTTCGCGC TGACCGAGCC GCACTCGGGC
TCGGACGCGA TGAGCATCCG AACGACGGCG GTCGAGGACG GCGATTCGCT CATCATCAAC
GGTACGAAGC ACTACATCAG CGGCGCGCCG TTCGCCGATT TCGCGATCGT GATGTGCGTG
ACCGATGCAA CCGCGACGCC GCCGCAGATC ACGGCCGTGC TGGTCGATCT CGACCTGCCC
GGCGTGAGCG TTCAGCACGA GTACGTGCCG ATGTCCGGCC AGCATATCGA CGCGGACATC
CGCTTCGTCG ACGTGCGCGT GCCGCGCGAG AACGTGTTCG GCGGCATCGG CAACGGTTTC
CGGCTCGGCA TGTCGCGCAT CAACGTGAAC CGGCTGCTGC ATTGCCCGAC GATGCTGGGC
CTCGCGATGT CCGCCTATCG CGCGTCGATC GACCACGCGC GCACGCGCCG GCAGTTCGGT
GGCCCGATCG CGCGCTTCCA GGCGATCCAG CACATGCTCG CCGATATGGC GGCCGCGCTG
TGGGCGTGCG AAAGCATGAT CGCGCACACG GCCGCGCTCG CCGATGCGGG CGCCGACCTG
CGGATGACGG CGTCCGCGTG CAAGCTGTAC GTGTCGGAGC GGTGCTTCGA GGTCGCGGAC
AAGGCCGTGC AGATTCACGG CAACGTCGGC GTGACGCGCG GCCATCCGGT CGAGCAGACG
TTCCGCAAGC TGCGGATGTT CCGCATCCTG ACCGGCACGA GCGAGATCCA GCGCAACGCG
ATCGCGAAGG CGATTCTCGA CCCGGCCGGC GCGGGGCGCG ACGCATGA
 
Protein sequence
MFDHLQRPEF VALRAAVLRF VDDELRPIER ELGLDSEDVW PRDVLRRVWQ RSAALGFYTA 
SLPVEIGGQG LSIAEVCALK ADLAACGAAL APHVLGELGG PPRIGNMLKY ATTAQLDRYF
RPVMRGEKST CFALTEPHSG SDAMSIRTTA VEDGDSLIIN GTKHYISGAP FADFAIVMCV
TDATATPPQI TAVLVDLDLP GVSVQHEYVP MSGQHIDADI RFVDVRVPRE NVFGGIGNGF
RLGMSRINVN RLLHCPTMLG LAMSAYRASI DHARTRRQFG GPIARFQAIQ HMLADMAAAL
WACESMIAHT AALADAGADL RMTASACKLY VSERCFEVAD KAVQIHGNVG VTRGHPVEQT
FRKLRMFRIL TGTSEIQRNA IAKAILDPAG AGRDA