More than 300 homologs were found in PanDaTox collection
for query gene Svir_33210 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007333  Tfu_1999  acyl-CoA dehydrogenase  84.1 
 
 
391 aa  669    Thermobifida fusca YX  Bacteria  normal  0.0248728  n/a   
 
 
-
 
NC_013159  Svir_33210  acyl-CoA dehydrogenase  100 
 
 
389 aa  796    Saccharomonospora viridis DSM 43017  Bacteria  normal  0.243663  normal  0.754036 
 
 
-
 
NC_013093  Amir_1569  acyl-CoA dehydrogenase domain protein  80.98 
 
 
389 aa  659    Actinosynnema mirum DSM 43827  Bacteria  normal  0.881248  n/a   
 
 
-
 
NC_014210  Ndas_1118  acyl-CoA dehydrogenase domain protein  76.41 
 
 
391 aa  613  9.999999999999999e-175  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.549204 
 
 
-
 
NC_013411  GYMC61_2494  Butyryl-CoA dehydrogenase  64.43 
 
 
392 aa  523  1e-147  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_0410  acyl-CoA dehydrogenase domain protein  63.66 
 
 
389 aa  506  9.999999999999999e-143  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.436291 
 
 
-
 
NC_008786  Veis_2517  acyl-CoA dehydrogenase domain-containing protein  44.25 
 
 
395 aa  305  7e-82  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_2326  acyl-CoA dehydrogenase domain protein  40.95 
 
 
398 aa  297  2e-79  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013922  Nmag_3415  acyl-CoA dehydrogenase domain protein  41.06 
 
 
414 aa  295  1e-78  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  41.62 
 
 
386 aa  283  5.000000000000001e-75  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  41.18 
 
 
388 aa  282  6.000000000000001e-75  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_007511  Bcep18194_B0146  Acyl-CoA dehydrogenase  39.58 
 
 
384 aa  280  3e-74  Burkholderia sp. 383  Bacteria  normal  normal  0.273639 
 
 
-
 
NC_011368  Rleg2_4494  acyl-CoA dehydrogenase domain protein  40.36 
 
 
386 aa  272  7e-72  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.211283  normal 
 
 
-
 
NC_009636  Smed_2175  acyl-CoA dehydrogenase domain-containing protein  39.18 
 
 
386 aa  271  1e-71  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2181  acyl-CoA dehydrogenase domain-containing protein  39.8 
 
 
386 aa  270  5e-71  Pseudomonas putida GB-1  Bacteria  normal  0.326272  normal 
 
 
-
 
NC_009512  Pput_2038  acyl-CoA dehydrogenase domain-containing protein  39.8 
 
 
386 aa  269  5e-71  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3725  acyl-CoA dehydrogenase domain-containing protein  39.8 
 
 
386 aa  269  7e-71  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4077  acyl-CoA dehydrogenase domain-containing protein  41.11 
 
 
388 aa  269  7e-71  Mycobacterium sp. JLS  Bacteria  normal  normal  0.226769 
 
 
-
 
NC_007802  Jann_3822  acyl-CoA dehydrogenase-like  40.1 
 
 
386 aa  268  1e-70  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5712  putative acyl-CoA dehydrogenase  39.03 
 
 
386 aa  268  1e-70  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_65820  putative acyl-CoA dehydrogenase  39.03 
 
 
386 aa  268  1e-70  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5512  acyl-CoA dehydrogenase domain-containing protein  39.32 
 
 
384 aa  268  1e-70  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4760  acyl-CoA dehydrogenase domain-containing protein  39.06 
 
 
384 aa  267  2e-70  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.661706 
 
 
-
 
NC_008044  TM1040_2796  butyryl-CoA dehydrogenase  39.39 
 
 
399 aa  267  2e-70  Ruegeria sp. TM1040  Bacteria  normal  normal  0.262809 
 
 
-
 
NC_012854  Rleg_6429  Butyryl-CoA dehydrogenase  39.39 
 
 
386 aa  265  1e-69  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.121067 
 
 
-
 
NC_011831  Cagg_2382  acyl-CoA dehydrogenase domain protein  40.62 
 
 
389 aa  265  1e-69  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3864  acyl-CoA dehydrogenase domain-containing protein  38.54 
 
 
388 aa  265  2e-69  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.264167  normal  0.493803 
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  40.05 
 
 
388 aa  264  3e-69  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_007517  Gmet_1523  Acyl-CoA dehydrogenase-like  39.95 
 
 
410 aa  261  2e-68  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.792427 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  39.8 
 
 
388 aa  260  3e-68  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_008781  Pnap_2701  acyl-CoA dehydrogenase domain-containing protein  39.53 
 
 
386 aa  260  3e-68  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.47386  normal 
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  39.44 
 
 
386 aa  259  4e-68  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_0919  acyl-CoA dehydrogenase domain protein  39.8 
 
 
383 aa  254  2.0000000000000002e-66  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  40.26 
 
 
384 aa  254  2.0000000000000002e-66  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_007348  Reut_B5285  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  38.66 
 
 
390 aa  253  5.000000000000001e-66  Ralstonia eutropha JMP134  Bacteria  normal  0.756161  n/a   
 
 
-
 
NC_009921  Franean1_3930  acyl-CoA dehydrogenase domain-containing protein  39.07 
 
 
385 aa  253  5.000000000000001e-66  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0411302 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  37.24 
 
 
379 aa  253  6e-66  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  39.85 
 
 
382 aa  251  2e-65  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  38.68 
 
 
380 aa  251  2e-65  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  38.11 
 
 
376 aa  251  2e-65  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  38.73 
 
 
384 aa  249  5e-65  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  38.32 
 
 
383 aa  249  6e-65  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  39.26 
 
 
384 aa  249  8e-65  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  38.99 
 
 
384 aa  248  9e-65  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_007336  Reut_C6302  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  39.13 
 
 
378 aa  248  1e-64  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  38.85 
 
 
384 aa  248  2e-64  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  38.85 
 
 
384 aa  247  2e-64  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_013922  Nmag_3108  acyl-CoA dehydrogenase domain protein  38.04 
 
 
383 aa  247  3e-64  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_010524  Lcho_1213  acyl-CoA dehydrogenase domain-containing protein  39.02 
 
 
386 aa  247  3e-64  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  37.79 
 
 
383 aa  247  3e-64  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  37.18 
 
 
376 aa  246  6.999999999999999e-64  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  37.18 
 
 
376 aa  246  6.999999999999999e-64  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  36.78 
 
 
379 aa  245  9e-64  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_009523  RoseRS_4146  acyl-CoA dehydrogenase domain-containing protein  37.28 
 
 
394 aa  245  9.999999999999999e-64  Roseiflexus sp. RS-1  Bacteria  normal  0.954368  normal 
 
 
-
 
NC_009767  Rcas_0583  acyl-CoA dehydrogenase domain-containing protein  38.3 
 
 
379 aa  244  3e-63  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.394739 
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  35.99 
 
 
379 aa  243  3.9999999999999997e-63  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2281  acyl-CoA dehydrogenase domain protein  38.36 
 
 
380 aa  243  3.9999999999999997e-63  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2518  acyl-CoA dehydrogenase domain-containing protein  36.48 
 
 
426 aa  243  5e-63  Thermobispora bispora DSM 43833  Bacteria  normal  0.0714534  normal 
 
 
-
 
NC_008025  Dgeo_0428  acyl-CoA dehydrogenase-like protein  38.13 
 
 
380 aa  243  5e-63  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.871589  normal  0.2576 
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  36.92 
 
 
381 aa  242  7e-63  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_011145  AnaeK_2192  acyl-CoA dehydrogenase domain protein  38.36 
 
 
380 aa  241  1e-62  Anaeromyxobacter sp. K  Bacteria  normal  0.516178  n/a   
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  36.67 
 
 
381 aa  241  1e-62  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  36.67 
 
 
376 aa  241  2e-62  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  36.67 
 
 
376 aa  241  2e-62  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  37.08 
 
 
376 aa  241  2e-62  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  36.67 
 
 
381 aa  241  2e-62  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  36.67 
 
 
376 aa  241  2e-62  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_011830  Dhaf_2695  acyl-CoA dehydrogenase domain protein  36.25 
 
 
382 aa  240  2.9999999999999997e-62  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0736  acyl-CoA dehydrogenase-like protein  36.34 
 
 
379 aa  239  4e-62  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.763418 
 
 
-
 
NC_009921  Franean1_2710  acyl-CoA dehydrogenase domain-containing protein  39.27 
 
 
395 aa  239  5e-62  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  35.68 
 
 
379 aa  239  5e-62  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  35.43 
 
 
379 aa  239  5.999999999999999e-62  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  35.68 
 
 
379 aa  239  6.999999999999999e-62  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  35.68 
 
 
379 aa  239  8e-62  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  37.7 
 
 
386 aa  239  8e-62  Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  38.03 
 
 
376 aa  238  1e-61  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_007760  Adeh_1665  butyryl-CoA dehydrogenase  38.11 
 
 
380 aa  238  1e-61  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  35.18 
 
 
379 aa  238  1e-61  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_013743  Htur_1175  acyl-CoA dehydrogenase domain protein  38.36 
 
 
381 aa  238  2e-61  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  35.43 
 
 
379 aa  237  2e-61  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  35.43 
 
 
379 aa  237  2e-61  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_009943  Dole_1921  acyl-CoA dehydrogenase domain-containing protein  36.75 
 
 
400 aa  238  2e-61  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  38.66 
 
 
382 aa  238  2e-61  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_008346  Swol_0268  butyryl-CoA dehydrogenase  36.76 
 
 
379 aa  237  2e-61  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  36.57 
 
 
379 aa  238  2e-61  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  37.24 
 
 
377 aa  237  2e-61  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1804  butyryl-CoA dehydrogenase  39.33 
 
 
386 aa  237  3e-61  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  38.66 
 
 
382 aa  237  3e-61  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  38.16 
 
 
375 aa  236  4e-61  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  35.43 
 
 
379 aa  236  4e-61  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  35.43 
 
 
379 aa  236  4e-61  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013744  Htur_4358  acyl-CoA dehydrogenase domain protein  38.62 
 
 
381 aa  236  5.0000000000000005e-61  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0892384  n/a   
 
 
-
 
NC_009253  Dred_1490  butyryl-CoA dehydrogenase  35.52 
 
 
378 aa  236  5.0000000000000005e-61  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  38.76 
 
 
377 aa  236  7e-61  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_002947  PP_2216  acyl-CoA dehydrogenase domain-containing protein  37.63 
 
 
375 aa  235  9e-61  Pseudomonas putida KT2440  Bacteria  normal  0.585123  normal 
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  35.81 
 
 
379 aa  235  1.0000000000000001e-60  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  36.06 
 
 
376 aa  234  1.0000000000000001e-60  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  37.56 
 
 
379 aa  235  1.0000000000000001e-60  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_009512  Pput_3522  acyl-CoA dehydrogenase domain-containing protein  37.37 
 
 
375 aa  234  2.0000000000000002e-60  Pseudomonas putida F1  Bacteria  normal  normal  0.0559083 
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  38.36 
 
 
380 aa  234  2.0000000000000002e-60  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>