More than 300 homologs were found in PanDaTox collection
for query gene Pmen_1723 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_1723  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
387 aa  789    Pseudomonas mendocina ymp  Bacteria  normal  0.0429936  normal  0.192279 
 
 
-
 
NC_002947  PP_2039  acyl-CoA dehydrogenase, putative  79.02 
 
 
388 aa  625  1e-178  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3703  acyl-CoA dehydrogenase domain-containing protein  78.76 
 
 
388 aa  626  1e-178  Pseudomonas putida F1  Bacteria  decreased coverage  0.0000394656  normal 
 
 
-
 
NC_010501  PputW619_3157  acyl-CoA dehydrogenase domain-containing protein  75.13 
 
 
387 aa  614  1e-175  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3610  acyl-CoA dehydrogenase domain-containing protein  58.79 
 
 
407 aa  436  1e-121  Delftia acidovorans SPH-1  Bacteria  normal  0.053028  normal  0.0314589 
 
 
-
 
NC_007974  Rmet_5133  acyl-CoA dehydrogenase  51.61 
 
 
391 aa  392  1e-108  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_5941  acyl-CoA dehydrogenase domain-containing protein  51.47 
 
 
394 aa  387  1e-106  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0480348 
 
 
-
 
NC_007511  Bcep18194_B2484  Acyl-CoA dehydrogenase  53.66 
 
 
395 aa  380  1e-104  Burkholderia sp. 383  Bacteria  normal  normal  0.959704 
 
 
-
 
NC_007348  Reut_B5308  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  52.15 
 
 
391 aa  376  1e-103  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_3889  acyl-CoA dehydrogenase domain-containing protein  52.57 
 
 
395 aa  375  1e-103  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0927975  normal  0.409924 
 
 
-
 
NC_014210  Ndas_1096  acyl-CoA dehydrogenase domain protein  43.4 
 
 
393 aa  303  2.0000000000000002e-81  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.667502 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  39.11 
 
 
382 aa  230  3e-59  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  37.47 
 
 
384 aa  229  4e-59  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_009656  PSPA7_5712  putative acyl-CoA dehydrogenase  36.64 
 
 
386 aa  226  7e-58  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_65820  putative acyl-CoA dehydrogenase  36.64 
 
 
386 aa  226  8e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3725  acyl-CoA dehydrogenase domain-containing protein  36.43 
 
 
386 aa  224  2e-57  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2038  acyl-CoA dehydrogenase domain-containing protein  36.43 
 
 
386 aa  224  2e-57  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  37.11 
 
 
383 aa  224  2e-57  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_010322  PputGB1_2181  acyl-CoA dehydrogenase domain-containing protein  36.43 
 
 
386 aa  224  2e-57  Pseudomonas putida GB-1  Bacteria  normal  0.326272  normal 
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  38.02 
 
 
382 aa  223  4.9999999999999996e-57  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  38.79 
 
 
398 aa  222  9.999999999999999e-57  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_2796  butyryl-CoA dehydrogenase  36.92 
 
 
399 aa  221  9.999999999999999e-57  Ruegeria sp. TM1040  Bacteria  normal  normal  0.262809 
 
 
-
 
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  37.31 
 
 
386 aa  221  9.999999999999999e-57  Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_007492  Pfl01_2867  Acyl-CoA dehydrogenase-like  39.58 
 
 
375 aa  221  1.9999999999999999e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.967944  normal  0.115681 
 
 
-
 
NC_010002  Daci_1165  acyl-CoA dehydrogenase domain-containing protein  38.64 
 
 
389 aa  220  3.9999999999999997e-56  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  36.06 
 
 
385 aa  219  5e-56  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  36.36 
 
 
376 aa  219  7e-56  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_002947  PP_2216  acyl-CoA dehydrogenase domain-containing protein  35.16 
 
 
375 aa  219  7.999999999999999e-56  Pseudomonas putida KT2440  Bacteria  normal  0.585123  normal 
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  37.98 
 
 
384 aa  218  1e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_009512  Pput_3522  acyl-CoA dehydrogenase domain-containing protein  35.16 
 
 
375 aa  218  2e-55  Pseudomonas putida F1  Bacteria  normal  normal  0.0559083 
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  37.98 
 
 
384 aa  218  2e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  35.92 
 
 
385 aa  217  2e-55  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  34.9 
 
 
375 aa  217  2.9999999999999998e-55  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  36.6 
 
 
400 aa  217  2.9999999999999998e-55  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  35.66 
 
 
385 aa  216  5e-55  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  37.6 
 
 
388 aa  215  9.999999999999999e-55  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  34.68 
 
 
377 aa  214  1.9999999999999998e-54  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0428  acyl-CoA dehydrogenase-like protein  36.71 
 
 
380 aa  212  7e-54  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.871589  normal  0.2576 
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  36.05 
 
 
388 aa  212  9e-54  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  35.92 
 
 
383 aa  211  2e-53  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_0919  acyl-CoA dehydrogenase domain protein  35.47 
 
 
383 aa  211  2e-53  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  35.4 
 
 
384 aa  210  3e-53  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  35.03 
 
 
376 aa  209  5e-53  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_012034  Athe_1232  acyl-CoA dehydrogenase domain protein  35.76 
 
 
381 aa  209  6e-53  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  34.62 
 
 
379 aa  208  1e-52  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  33.77 
 
 
379 aa  207  2e-52  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007973  Rmet_0108  acyl-CoA dehydrogenase-like protein  34.11 
 
 
376 aa  207  2e-52  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  33.51 
 
 
379 aa  207  3e-52  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  33.68 
 
 
379 aa  207  3e-52  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_013171  Apre_0081  acyl-CoA dehydrogenase domain protein  34.61 
 
 
642 aa  206  4e-52  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2136  acyl-CoA dehydrogenase domain-containing protein  35.31 
 
 
380 aa  206  5e-52  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.281355 
 
 
-
 
NC_013757  Gobs_1375  acyl-CoA dehydrogenase domain protein  37.27 
 
 
384 aa  206  6e-52  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  34.67 
 
 
379 aa  206  7e-52  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  35.04 
 
 
386 aa  205  1e-51  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  37.98 
 
 
378 aa  205  1e-51  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
NC_009921  Franean1_3930  acyl-CoA dehydrogenase domain-containing protein  38.51 
 
 
385 aa  205  1e-51  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0411302 
 
 
-
 
NC_011894  Mnod_2176  acyl-CoA dehydrogenase domain protein  39.42 
 
 
380 aa  204  1e-51  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.110006  n/a   
 
 
-
 
NC_009504  BOV_A0391  acyl-CoA dehydrogenase  38.1 
 
 
375 aa  204  1e-51  Brucella ovis ATCC 25840  Bacteria  normal  0.31925  n/a   
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  34.29 
 
 
379 aa  204  2e-51  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  34.55 
 
 
379 aa  204  2e-51  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0140  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  34.95 
 
 
376 aa  204  2e-51  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  34.96 
 
 
395 aa  204  2e-51  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_3108  acyl-CoA dehydrogenase domain protein  33.07 
 
 
383 aa  204  2e-51  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_012854  Rleg_6429  Butyryl-CoA dehydrogenase  36.83 
 
 
386 aa  204  2e-51  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.121067 
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  34.29 
 
 
379 aa  204  2e-51  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1842  acyl-CoA dehydrogenase domain-containing protein  33.59 
 
 
375 aa  204  2e-51  Pseudomonas putida GB-1  Bacteria  normal  0.0292697  normal  0.208883 
 
 
-
 
NC_009523  RoseRS_4146  acyl-CoA dehydrogenase domain-containing protein  34.74 
 
 
394 aa  203  3e-51  Roseiflexus sp. RS-1  Bacteria  normal  0.954368  normal 
 
 
-
 
NC_012857  Rpic12D_3467  acyl-CoA dehydrogenase domain protein  36.73 
 
 
385 aa  204  3e-51  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0842785 
 
 
-
 
NC_007974  Rmet_5908  acyl-CoA dehydrogenase-like protein  35.97 
 
 
385 aa  204  3e-51  Cupriavidus metallidurans CH34  Bacteria  normal  0.276142  normal 
 
 
-
 
NC_010678  Rpic_4539  acyl-CoA dehydrogenase domain protein  36.73 
 
 
385 aa  204  3e-51  Ralstonia pickettii 12J  Bacteria  normal  0.452852  normal  0.739278 
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  34.29 
 
 
379 aa  203  4e-51  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  34.03 
 
 
379 aa  203  4e-51  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  37.03 
 
 
382 aa  203  4e-51  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_009439  Pmen_2037  acyl-CoA dehydrogenase domain-containing protein  35.31 
 
 
375 aa  203  4e-51  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.666233 
 
 
-
 
NC_011368  Rleg2_4494  acyl-CoA dehydrogenase domain protein  36.41 
 
 
386 aa  203  4e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.211283  normal 
 
 
-
 
NC_010511  M446_2476  acyl-CoA dehydrogenase domain-containing protein  40.92 
 
 
380 aa  203  5e-51  Methylobacterium sp. 4-46  Bacteria  normal  0.893721  normal  0.185436 
 
 
-
 
NC_008781  Pnap_2701  acyl-CoA dehydrogenase domain-containing protein  35.32 
 
 
386 aa  202  6e-51  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.47386  normal 
 
 
-
 
NC_007333  Tfu_1999  acyl-CoA dehydrogenase  35.58 
 
 
391 aa  202  7e-51  Thermobifida fusca YX  Bacteria  normal  0.0248728  n/a   
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  34.55 
 
 
379 aa  202  8e-51  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  34.29 
 
 
379 aa  202  8e-51  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  33.77 
 
 
379 aa  202  9e-51  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1659  acyl-CoA dehydrogenase domain protein  33.25 
 
 
390 aa  202  9e-51  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.487392 
 
 
-
 
NC_014150  Bmur_2026  acyl-CoA dehydrogenase domain protein  36.11 
 
 
641 aa  202  9e-51  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000211003  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  34.55 
 
 
379 aa  202  9.999999999999999e-51  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  34.55 
 
 
379 aa  202  9.999999999999999e-51  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1569  acyl-CoA dehydrogenase domain protein  35.75 
 
 
389 aa  201  9.999999999999999e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.881248  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  34.55 
 
 
379 aa  202  9.999999999999999e-51  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0447  acyl-CoA dehydrogenase  37.5 
 
 
375 aa  201  1.9999999999999998e-50  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  34.64 
 
 
388 aa  201  1.9999999999999998e-50  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_008786  Veis_2500  isovaleryl-CoA dehydrogenase  35.64 
 
 
388 aa  200  3e-50  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.353952  normal 
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  34.7 
 
 
384 aa  200  3e-50  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  34.7 
 
 
384 aa  200  3e-50  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_009767  Rcas_0583  acyl-CoA dehydrogenase domain-containing protein  34.21 
 
 
379 aa  200  3e-50  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.394739 
 
 
-
 
NC_011891  A2cp1_2281  acyl-CoA dehydrogenase domain protein  35.9 
 
 
380 aa  200  3e-50  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA1088  acyl-CoA dehydrogenase  35.62 
 
 
380 aa  199  5e-50  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2500  acyl-CoA dehydrogenase domain-containing protein  36.31 
 
 
380 aa  199  5e-50  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1118  acyl-CoA dehydrogenase domain protein  35.62 
 
 
391 aa  199  6e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.549204 
 
 
-
 
NC_007348  Reut_B5319  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  38.22 
 
 
385 aa  199  7e-50  Ralstonia eutropha JMP134  Bacteria  normal  0.398534  n/a   
 
 
-
 
NC_013132  Cpin_6291  acyl-CoA dehydrogenase domain protein  35.71 
 
 
379 aa  199  9e-50  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2589  acyl-CoA dehydrogenase domain protein  36.23 
 
 
390 aa  199  9e-50  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000683478  n/a   
 
 
-
 
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