Gene Ndas_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1096 
Symbol 
ID9244942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1346179 
End bp1347360 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content71% 
IMG OID 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003679044 
Protein GI297560070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.667502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGAC CGGGCCACCA CGACAATCCG CGCCTCGACG CGCTGGTCAC CGGGCTCCGG 
GACTACCTGT CCGGAGAGCT CGCCGACTAC GAGGAGGAAC TCGGACTGAC CCCCGAGGCC
GAGCTGCGCC GGTCCATGCT GGAACCGGTG TGGCGGCGCA GCCGCGAACT CGGCTTCTAC
GGCGTCCACC TGCCCGAGCA CCTCGGCGGA CAGGGACTGT CCCACACGGA ACTGGCGGCG
CTCAAGGAGG AGGTGGGCGC CTCCGGCCGC GTGCTGGCCA CGAGCGTGCT CGGCGACATG
GGCGGACCGC TGCGGATCGG CGCGATCTTC GAGCACGCCA CCGAGTACCA GACGGAGAAG
TACCTGCTCC CGGTCGTCAG GGCCGAGCGC GCGTGCTGCT TCTCCATGAC CGAGGACGAC
GCGGGCTCCG ACGTGCGCCG TATGCGCACG ACCGCGACCC CGGTCGCCGG CGGCTACCGC
GTCACCGGGC ACAAGGTGTT CAGCACCGGC GGCACCTTCG CGGACTTCTC GATCCTGGTC
GCCCGCCTGG ACTCCTCCGA CGACCGGTAC TGCGCGTTCT TCGTCGACCT GGACTCCCCG
GGCTGTCGCG TCACACCCGG CAGGACGCCC CTGTCGGGCC AGAACATCGA GAGCGACGTC
GTCCTCCAGG ACTGTTTCGT CCCCTCGGAG AACCTGCTCG GCGAGGAGGG GCAGGGCCTG
CGCATCGCCC TCGGCCGGGT CACGACGAAC CGGCTGCTCC ACTGCCCCAC CGCGCTCGGC
GCGGCCCGGC GGGCCATCCG CCTGGCCCTG GACTTCGCCG CCACGCGCCA GGTGTCCGGC
GGACTCCTCA TCGAGAAGCA GGCGATCCAG CACAAGCTCG CCGACATGGC CACGGACTTC
TACGCCGCCC GTTCGATGAC CTACGACGCC CTCGCCGCGC TCGACGCGGG GGAGCGGCCC
CGGGTGGAGT CCTTCATGTG CAAGCTGTTC GTGGCCGAGC GCGCGTTCGC CATCGCGGAC
CAGGCGATGC AGATCCACGG CAAGGCCGGG ATGGTGCGCG GCGCCCCGGT GGACGTGATC
TGGCGGCAGC TGCGCATGTT CCGCGTGCTG ACCGGCGCGT CGGAGATCCA GCGCAACGGC
ATCATCCGCG AACTCGCCAG AGCCGAGGGG GCCCCGGCAT GA
 
Protein sequence
MLRPGHHDNP RLDALVTGLR DYLSGELADY EEELGLTPEA ELRRSMLEPV WRRSRELGFY 
GVHLPEHLGG QGLSHTELAA LKEEVGASGR VLATSVLGDM GGPLRIGAIF EHATEYQTEK
YLLPVVRAER ACCFSMTEDD AGSDVRRMRT TATPVAGGYR VTGHKVFSTG GTFADFSILV
ARLDSSDDRY CAFFVDLDSP GCRVTPGRTP LSGQNIESDV VLQDCFVPSE NLLGEEGQGL
RIALGRVTTN RLLHCPTALG AARRAIRLAL DFAATRQVSG GLLIEKQAIQ HKLADMATDF
YAARSMTYDA LAALDAGERP RVESFMCKLF VAERAFAIAD QAMQIHGKAG MVRGAPVDVI
WRQLRMFRVL TGASEIQRNG IIRELARAEG APA