More than 300 homologs were found in PanDaTox collection
for query gene PputW619_3157 on replicon NC_010501
Organism: Pseudomonas putida W619



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_2039  acyl-CoA dehydrogenase, putative  84.97 
 
 
388 aa  672    Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3157  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
387 aa  793    Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3703  acyl-CoA dehydrogenase domain-containing protein  84.72 
 
 
388 aa  673    Pseudomonas putida F1  Bacteria  decreased coverage  0.0000394656  normal 
 
 
-
 
NC_009439  Pmen_1723  acyl-CoA dehydrogenase domain-containing protein  75.13 
 
 
387 aa  614  1e-175  Pseudomonas mendocina ymp  Bacteria  normal  0.0429936  normal  0.192279 
 
 
-
 
NC_010002  Daci_3610  acyl-CoA dehydrogenase domain-containing protein  57.55 
 
 
407 aa  432  1e-120  Delftia acidovorans SPH-1  Bacteria  normal  0.053028  normal  0.0314589 
 
 
-
 
NC_007974  Rmet_5133  acyl-CoA dehydrogenase  54.16 
 
 
391 aa  420  1e-116  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5308  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  54.01 
 
 
391 aa  399  9.999999999999999e-111  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B2484  Acyl-CoA dehydrogenase  54.01 
 
 
395 aa  400  9.999999999999999e-111  Burkholderia sp. 383  Bacteria  normal  normal  0.959704 
 
 
-
 
NC_010515  Bcenmc03_3889  acyl-CoA dehydrogenase domain-containing protein  53.21 
 
 
395 aa  393  1e-108  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0927975  normal  0.409924 
 
 
-
 
NC_008392  Bamb_5941  acyl-CoA dehydrogenase domain-containing protein  51.88 
 
 
394 aa  392  1e-108  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0480348 
 
 
-
 
NC_014210  Ndas_1096  acyl-CoA dehydrogenase domain protein  43.67 
 
 
393 aa  311  1e-83  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.667502 
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  40.85 
 
 
382 aa  241  2e-62  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_008463  PA14_65820  putative acyl-CoA dehydrogenase  38.48 
 
 
386 aa  239  6.999999999999999e-62  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5712  putative acyl-CoA dehydrogenase  38.48 
 
 
386 aa  239  8e-62  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  38.5 
 
 
376 aa  238  1e-61  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  37.63 
 
 
385 aa  236  4e-61  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  39.37 
 
 
383 aa  236  5.0000000000000005e-61  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  38.16 
 
 
385 aa  236  5.0000000000000005e-61  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  37.37 
 
 
385 aa  235  8e-61  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3725  acyl-CoA dehydrogenase domain-containing protein  36.83 
 
 
386 aa  234  2.0000000000000002e-60  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2038  acyl-CoA dehydrogenase domain-containing protein  36.83 
 
 
386 aa  234  2.0000000000000002e-60  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2181  acyl-CoA dehydrogenase domain-containing protein  36.83 
 
 
386 aa  234  2.0000000000000002e-60  Pseudomonas putida GB-1  Bacteria  normal  0.326272  normal 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  39.31 
 
 
382 aa  233  3e-60  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  39.69 
 
 
398 aa  234  3e-60  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  36.73 
 
 
377 aa  232  7.000000000000001e-60  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  38.44 
 
 
386 aa  232  1e-59  Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_008786  Veis_2500  isovaleryl-CoA dehydrogenase  38.7 
 
 
388 aa  231  2e-59  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.353952  normal 
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  37.31 
 
 
384 aa  231  2e-59  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  37.57 
 
 
383 aa  229  6e-59  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  36.9 
 
 
376 aa  228  9e-59  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_010002  Daci_1165  acyl-CoA dehydrogenase domain-containing protein  38.76 
 
 
389 aa  228  1e-58  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  37.77 
 
 
388 aa  228  1e-58  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  36.53 
 
 
378 aa  228  2e-58  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  37.53 
 
 
395 aa  227  3e-58  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0140  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  38.5 
 
 
376 aa  225  1e-57  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0108  acyl-CoA dehydrogenase-like protein  37.77 
 
 
376 aa  224  2e-57  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  35.19 
 
 
388 aa  223  3e-57  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_008044  TM1040_2796  butyryl-CoA dehydrogenase  35.66 
 
 
399 aa  223  4e-57  Ruegeria sp. TM1040  Bacteria  normal  normal  0.262809 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  33.42 
 
 
379 aa  223  4.9999999999999996e-57  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  33.42 
 
 
379 aa  223  6e-57  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013159  Svir_33210  acyl-CoA dehydrogenase  36.34 
 
 
389 aa  222  7e-57  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.243663  normal  0.754036 
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  36.86 
 
 
386 aa  222  9e-57  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  36.13 
 
 
375 aa  221  9.999999999999999e-57  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  35.4 
 
 
379 aa  221  1.9999999999999999e-56  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0428  acyl-CoA dehydrogenase-like protein  38.35 
 
 
380 aa  220  3e-56  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.871589  normal  0.2576 
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  37.53 
 
 
384 aa  220  3e-56  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_009921  Franean1_2710  acyl-CoA dehydrogenase domain-containing protein  38.18 
 
 
395 aa  220  3.9999999999999997e-56  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1569  acyl-CoA dehydrogenase domain protein  37.47 
 
 
389 aa  219  5e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  0.881248  n/a   
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  37.27 
 
 
384 aa  219  7e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  38.21 
 
 
382 aa  219  8.999999999999998e-56  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  35.14 
 
 
379 aa  218  1e-55  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4367  acyl-CoA dehydrogenase domain protein  39.31 
 
 
418 aa  218  1e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  35.14 
 
 
379 aa  217  2e-55  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_2326  acyl-CoA dehydrogenase domain protein  33.83 
 
 
398 aa  218  2e-55  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  33.69 
 
 
379 aa  217  2e-55  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  34.88 
 
 
379 aa  217  2e-55  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_009439  Pmen_2037  acyl-CoA dehydrogenase domain-containing protein  36.97 
 
 
375 aa  217  2.9999999999999998e-55  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.666233 
 
 
-
 
NC_013757  Gobs_1375  acyl-CoA dehydrogenase domain protein  38.22 
 
 
384 aa  216  4e-55  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  34.63 
 
 
379 aa  216  4e-55  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  35.14 
 
 
379 aa  216  4e-55  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_010678  Rpic_4539  acyl-CoA dehydrogenase domain protein  37.63 
 
 
385 aa  216  7e-55  Ralstonia pickettii 12J  Bacteria  normal  0.452852  normal  0.739278 
 
 
-
 
NC_012857  Rpic12D_3467  acyl-CoA dehydrogenase domain protein  37.63 
 
 
385 aa  216  7e-55  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0842785 
 
 
-
 
NC_009484  Acry_1556  acyl-CoA dehydrogenase domain-containing protein  38.28 
 
 
386 aa  216  7e-55  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  34.66 
 
 
384 aa  215  8e-55  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  33.5 
 
 
379 aa  215  9e-55  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_003296  RS01762  putative acyl-CoA dehydrogenase oxidoreductase protein  38.79 
 
 
385 aa  215  9.999999999999999e-55  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.272038 
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  35.14 
 
 
379 aa  215  9.999999999999999e-55  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1999  acyl-CoA dehydrogenase  37.24 
 
 
391 aa  215  9.999999999999999e-55  Thermobifida fusca YX  Bacteria  normal  0.0248728  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  34.88 
 
 
379 aa  214  9.999999999999999e-55  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  36.29 
 
 
400 aa  214  9.999999999999999e-55  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_002947  PP_2216  acyl-CoA dehydrogenase domain-containing protein  35.16 
 
 
375 aa  214  1.9999999999999998e-54  Pseudomonas putida KT2440  Bacteria  normal  0.585123  normal 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  34.88 
 
 
379 aa  214  1.9999999999999998e-54  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  34.88 
 
 
379 aa  214  1.9999999999999998e-54  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2129  Acyl-CoA dehydrogenase  36.91 
 
 
386 aa  214  1.9999999999999998e-54  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0260778 
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  36.29 
 
 
379 aa  214  1.9999999999999998e-54  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_009512  Pput_3522  acyl-CoA dehydrogenase domain-containing protein  35.16 
 
 
375 aa  213  2.9999999999999995e-54  Pseudomonas putida F1  Bacteria  normal  normal  0.0559083 
 
 
-
 
NC_012856  Rpic12D_0132  acyl-CoA dehydrogenase domain protein  37.5 
 
 
376 aa  213  3.9999999999999995e-54  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4102  Acyl-CoA dehydrogenase-like  35.29 
 
 
415 aa  213  3.9999999999999995e-54  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.380982  normal  0.086653 
 
 
-
 
NC_008781  Pnap_2701  acyl-CoA dehydrogenase domain-containing protein  36.05 
 
 
386 aa  213  3.9999999999999995e-54  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.47386  normal 
 
 
-
 
NC_011891  A2cp1_2281  acyl-CoA dehydrogenase domain protein  38.4 
 
 
380 aa  213  4.9999999999999996e-54  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  34.13 
 
 
388 aa  213  4.9999999999999996e-54  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_007973  Rmet_1816  acyl-CoA dehydrogenase-like protein  37.14 
 
 
429 aa  213  5.999999999999999e-54  Cupriavidus metallidurans CH34  Bacteria  normal  0.0196409  hitchhiker  0.006326 
 
 
-
 
NC_010622  Bphy_0176  acyl-CoA dehydrogenase domain-containing protein  38.83 
 
 
376 aa  212  7e-54  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0124  acyl-CoA dehydrogenase domain protein  37.5 
 
 
376 aa  212  7.999999999999999e-54  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3930  acyl-CoA dehydrogenase domain-containing protein  37.14 
 
 
385 aa  212  7.999999999999999e-54  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0411302 
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  33.16 
 
 
402 aa  212  7.999999999999999e-54  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_008786  Veis_3864  acyl-CoA dehydrogenase domain-containing protein  36.41 
 
 
388 aa  212  9e-54  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.264167  normal  0.493803 
 
 
-
 
NC_012854  Rleg_6504  acyl-CoA dehydrogenase domain protein  35.28 
 
 
375 aa  211  1e-53  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.285028  normal  0.547313 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  35.9 
 
 
376 aa  212  1e-53  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0847  acyl-CoA dehydrogenase domain-containing protein  39.32 
 
 
386 aa  211  1e-53  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013922  Nmag_3108  acyl-CoA dehydrogenase domain protein  33.59 
 
 
383 aa  212  1e-53  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_012792  Vapar_6219  acyl-CoA dehydrogenase domain protein  36.64 
 
 
387 aa  211  2e-53  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1842  acyl-CoA dehydrogenase domain-containing protein  35.16 
 
 
375 aa  211  2e-53  Pseudomonas putida GB-1  Bacteria  normal  0.0292697  normal  0.208883 
 
 
-
 
NC_013743  Htur_0919  acyl-CoA dehydrogenase domain protein  33.16 
 
 
383 aa  211  2e-53  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007974  Rmet_5908  acyl-CoA dehydrogenase-like protein  36.68 
 
 
385 aa  211  2e-53  Cupriavidus metallidurans CH34  Bacteria  normal  0.276142  normal 
 
 
-
 
NC_009675  Anae109_2136  acyl-CoA dehydrogenase domain-containing protein  37.33 
 
 
380 aa  211  2e-53  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.281355 
 
 
-
 
NC_010002  Daci_5985  acyl-CoA dehydrogenase domain-containing protein  34.82 
 
 
376 aa  211  2e-53  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00997774 
 
 
-
 
NC_004311  BRA1088  acyl-CoA dehydrogenase  37.63 
 
 
380 aa  210  3e-53  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1213  acyl-CoA dehydrogenase domain-containing protein  35.37 
 
 
386 aa  210  3e-53  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007511  Bcep18194_B0146  Acyl-CoA dehydrogenase  36.15 
 
 
384 aa  210  3e-53  Burkholderia sp. 383  Bacteria  normal  normal  0.273639 
 
 
-
 
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