| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6219 |
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| Symbol | |
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| ID | 7975435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 949685 |
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| End bp | 950848 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796789 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002948048 |
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| Protein GI | 239820863 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGCT ACAGCGACCG CCTTCCGGCG CTGCGCGAGG CGGTCCGGCG CTTCGTCGAG
GAAGAAGCCA TTCCGCGCGA GTGCCCGGCG CTGGCCCACG ACCTGGATGC GCTCGAAGCC
GCGGTGCGTT CGCTGCGCGC CAAGGCCATG GAGGCCGGCA TCTACGCACC GCAGCTGCCG
GTGGCGTGGG GCGGCCTGGG CCTGTCCTGG CGCGATCGCT CGGTGGTGCT CGAAGAGGCC
GGCCGGAGCT TCCTTGCGCC ATTGGCCATG AACTGCGCGC CGCCGGACCA GCCCAACATG
ATCAACCTGC TGGCCGACGG AAGGCCGGCG CAGCAGCAGC GCTATCTGGT GCCGCTCGCG
CGCGGCGAGG CCCGCTCGTG CTTTGCGATG ACCGAACCCG AGCCCGGCGC CGGGTCCGAT
CCGTCGATGC TGCAGACCGT GGCCGAGCGC CGCCCCGGCG GCTGGGTCAT CAACGGCCGC
AAGTGGTTCA TCAGCGGCGC GGTCGGTGCC GCGTTCGCGC TGGTGCTGGC GAAGACGGGC
GAGGGCGCGA CGATCTTCAT CGTCGATGCC GGCAACCCCG GCTACCGCGT GGTGCGCAAC
ATCGCGAGCA TCGATGGCTT CCAGATCGGC GGGCATGGCG AGATCGAACT GCAGGACTGC
TTCGTGGATG ACGGCGCGGT GCTGGGCGAG GTGGGCCGGG GCTTCGCCTA CGCGCAGGCG
CGGCTCGAAC CGGCGCGCCT GTCGCACTGC ATGCGCTTCA TCGGCCGCGC CTCGCGCGCC
ATGGCGCTGG CGCAGGACTA CGCCAACCGG CGCCACTCGT TCGGGCAGCC GCTCGCGCAG
CTGCAGCAGG TGCAGGCGAT GGTGTCCGAC TCGCACATCG ACCTGCATGC CGCACGCCTG
ATGACGTGGC ACGCGGCCGC CAAGCTCGAT GCCAAGCAAG GCATCAAGCA CGAGTCGGCC
ATGGTCAAGG TGTTCGTGTC GGAAGCCGTG GGGCGCGTGG CGGACCGCGC CGCGCAGATC
ATGGGCGCGC TCGGCATGTC GGAAGACTCG CCCGTGTCGA TGATCCTGCG CGAGATGCGG
CCCTTTCGCG TCTACGACGG CGCGTCGGAG GTGCACCGCT CGACGCTGGC GCGGCGCATC
CTGAAGGAAT CGCTGCGTCC TTGA
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| Protein sequence | MFGYSDRLPA LREAVRRFVE EEAIPRECPA LAHDLDALEA AVRSLRAKAM EAGIYAPQLP
VAWGGLGLSW RDRSVVLEEA GRSFLAPLAM NCAPPDQPNM INLLADGRPA QQQRYLVPLA
RGEARSCFAM TEPEPGAGSD PSMLQTVAER RPGGWVINGR KWFISGAVGA AFALVLAKTG
EGATIFIVDA GNPGYRVVRN IASIDGFQIG GHGEIELQDC FVDDGAVLGE VGRGFAYAQA
RLEPARLSHC MRFIGRASRA MALAQDYANR RHSFGQPLAQ LQQVQAMVSD SHIDLHAARL
MTWHAAAKLD AKQGIKHESA MVKVFVSEAV GRVADRAAQI MGALGMSEDS PVSMILREMR
PFRVYDGASE VHRSTLARRI LKESLRP
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