Gene Veis_3864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3864 
Symbol 
ID4693227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4260518 
End bp4261684 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content67% 
IMG OID639851613 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_998591 
Protein GI121610784 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.264167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.493803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATTTCA AACTGGAAGA AGAACACCAG ATGATCCAGG ACTTGGTGGC CCGCTTTGTG 
CGCGAGCAGT TGATGCCACT GGAATCGTCA GCGCTGGCAC GGGAGGCATC GACCGGCGTG
CTGGCACTGC TGCCGGAGGA GCAGGAACGG CTCGACGCGC TGTCGCGCGA ACTGGGCCTG
TGGGGACTGG ACGCGCCCGC CGAGATGGAC GGCCACGACC TGCCGGTGGT CGCGATGGTC
GGCGTGAACG AAGAGCTGGG CAAAACCATC ACGCCCTACG ACTTGCCGCC CGACTCCCCC
AATCTGCGCA TGCTGATGCA GACCGCCAAC GCCAGCCAGC GGGAACGGTA TCTGGCCCCT
TATGCACGGG GCGAGACCGC CTCGGCGATC GCGATCTCGG AGCCCGGTGC CGGCGGCGAT
CCGTCGATGA TGAGCACACG GGCGGTGCGC GAGGGCGACG ACTGGACCCT CAACGGCCGC
AAGATCTGGA TCAGCAAGGC CGACAAGGCC GACTGGACCA TCGTGATGGT CGTCACCGAC
AAGGCACTGG GCGCGCGCGG CGGCATCTCG GCCTTCATCG TCGACAAGGG CACGCCCGGC
TTCAAGGTGG AGCGGCGCAT TCCTATGATT GGAGGGGTCT CCACCTACGA AGTGGTACTG
GAAGACTGCC GTGTGCCCGG CACCCAGCTC CTGGGTCAGG AAGGCGCCGG TTTCGCGCCG
ATGCAGGCGC GCCTGTCCAG CCGACGGGTG CAGATGGCCG CCTGGTGCAT TGGCCGCGCG
CAGCGGGCGC TCGACATGAT CTGCGAATAC GCGCCGCAGC GGCGGACCTT CGGCGCACCC
CTGGCGGAGC GCCAGGCCAT CCAGTGGTGG GTCGCAGACG CCGCCACCCG CATTCACGCC
TGTCGGCTCA TGACCTATGA CGCAGCGGCC CGCATCGACG CCGGCGACGA GGCGCGCACG
CAGGTTTCCA TGATCAAGGT CTTCGCGACC GAGATGGCCT GGGAAGTCAT CGACCGGGCC
ATGCAGGCCC TGGGCGCGAT GGGCATGACC AAGGAGCTGC CCCTGCAGCA GATGGCCAAC
GAAACCCGGC TGATGCGCAT CTACGAAGGC CCGAGCGAAG TGCACCGGTG GGTGATCGCG
CGGGACCTCC TGGGACTCAA GCGCTGA
 
Protein sequence
MNFKLEEEHQ MIQDLVARFV REQLMPLESS ALAREASTGV LALLPEEQER LDALSRELGL 
WGLDAPAEMD GHDLPVVAMV GVNEELGKTI TPYDLPPDSP NLRMLMQTAN ASQRERYLAP
YARGETASAI AISEPGAGGD PSMMSTRAVR EGDDWTLNGR KIWISKADKA DWTIVMVVTD
KALGARGGIS AFIVDKGTPG FKVERRIPMI GGVSTYEVVL EDCRVPGTQL LGQEGAGFAP
MQARLSSRRV QMAAWCIGRA QRALDMICEY APQRRTFGAP LAERQAIQWW VADAATRIHA
CRLMTYDAAA RIDAGDEART QVSMIKVFAT EMAWEVIDRA MQALGAMGMT KELPLQQMAN
ETRLMRIYEG PSEVHRWVIA RDLLGLKR