More than 300 homologs were found in PanDaTox collection
for query gene Lcho_1213 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_1213  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
386 aa  793    Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008781  Pnap_2701  acyl-CoA dehydrogenase domain-containing protein  80.57 
 
 
386 aa  655    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.47386  normal 
 
 
-
 
NC_011368  Rleg2_4494  acyl-CoA dehydrogenase domain protein  44.01 
 
 
386 aa  299  5e-80  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.211283  normal 
 
 
-
 
NC_012854  Rleg_6429  Butyryl-CoA dehydrogenase  43.23 
 
 
386 aa  293  2e-78  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.121067 
 
 
-
 
NC_009636  Smed_2175  acyl-CoA dehydrogenase domain-containing protein  41.67 
 
 
386 aa  291  9e-78  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_2796  butyryl-CoA dehydrogenase  41.88 
 
 
399 aa  286  2.9999999999999996e-76  Ruegeria sp. TM1040  Bacteria  normal  normal  0.262809 
 
 
-
 
NC_007802  Jann_3822  acyl-CoA dehydrogenase-like  41.93 
 
 
386 aa  285  1.0000000000000001e-75  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5712  putative acyl-CoA dehydrogenase  41.34 
 
 
386 aa  282  6.000000000000001e-75  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_65820  putative acyl-CoA dehydrogenase  41.09 
 
 
386 aa  281  2e-74  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2181  acyl-CoA dehydrogenase domain-containing protein  40.05 
 
 
386 aa  275  7e-73  Pseudomonas putida GB-1  Bacteria  normal  0.326272  normal 
 
 
-
 
NC_009512  Pput_2038  acyl-CoA dehydrogenase domain-containing protein  40.05 
 
 
386 aa  275  9e-73  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3725  acyl-CoA dehydrogenase domain-containing protein  39.79 
 
 
386 aa  273  4.0000000000000004e-72  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  41.67 
 
 
382 aa  265  1e-69  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_008699  Noca_0046  acyl-CoA dehydrogenase domain-containing protein  38.23 
 
 
387 aa  262  8e-69  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4367  acyl-CoA dehydrogenase domain protein  40.75 
 
 
418 aa  258  8e-68  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2494  Butyryl-CoA dehydrogenase  39.74 
 
 
392 aa  255  8e-67  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008243  Meso_4475  acyl-CoA dehydrogenase-like  38.48 
 
 
381 aa  250  3e-65  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2517  acyl-CoA dehydrogenase domain-containing protein  39.09 
 
 
395 aa  250  4e-65  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  38.38 
 
 
382 aa  249  8e-65  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_013159  Svir_33210  acyl-CoA dehydrogenase  39.02 
 
 
389 aa  247  3e-64  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.243663  normal  0.754036 
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  37.98 
 
 
386 aa  241  1e-62  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  36.67 
 
 
379 aa  241  1e-62  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  37.14 
 
 
388 aa  241  2e-62  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  38.79 
 
 
383 aa  239  8e-62  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_013093  Amir_1569  acyl-CoA dehydrogenase domain protein  38.05 
 
 
389 aa  239  9e-62  Actinosynnema mirum DSM 43827  Bacteria  normal  0.881248  n/a   
 
 
-
 
NC_010002  Daci_1165  acyl-CoA dehydrogenase domain-containing protein  38.22 
 
 
389 aa  237  2e-61  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  38.22 
 
 
386 aa  237  3e-61  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  37.5 
 
 
388 aa  237  3e-61  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_014210  Ndas_1118  acyl-CoA dehydrogenase domain protein  39.02 
 
 
391 aa  236  5.0000000000000005e-61  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.549204 
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  36.98 
 
 
388 aa  235  8e-61  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_007333  Tfu_1999  acyl-CoA dehydrogenase  38.86 
 
 
391 aa  234  1.0000000000000001e-60  Thermobifida fusca YX  Bacteria  normal  0.0248728  n/a   
 
 
-
 
NC_008261  CPF_2584  butyryl-CoA dehydrogenase  35.84 
 
 
379 aa  235  1.0000000000000001e-60  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2286  butyryl-CoA dehydrogenase  35.84 
 
 
379 aa  235  1.0000000000000001e-60  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0410  acyl-CoA dehydrogenase domain protein  37.21 
 
 
389 aa  234  2.0000000000000002e-60  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.436291 
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  37.63 
 
 
385 aa  234  2.0000000000000002e-60  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  37.37 
 
 
383 aa  234  2.0000000000000002e-60  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  37.63 
 
 
385 aa  234  2.0000000000000002e-60  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6843  acyl-CoA dehydrogenase domain-containing protein  37.24 
 
 
393 aa  234  2.0000000000000002e-60  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2500  isovaleryl-CoA dehydrogenase  39.08 
 
 
388 aa  234  3e-60  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.353952  normal 
 
 
-
 
NC_008025  Dgeo_0428  acyl-CoA dehydrogenase-like protein  37.02 
 
 
380 aa  232  6e-60  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.871589  normal  0.2576 
 
 
-
 
NC_008786  Veis_3864  acyl-CoA dehydrogenase domain-containing protein  36.18 
 
 
388 aa  232  9e-60  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.264167  normal  0.493803 
 
 
-
 
NC_013757  Gobs_1375  acyl-CoA dehydrogenase domain protein  37.14 
 
 
384 aa  231  1e-59  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  36.6 
 
 
395 aa  231  1e-59  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  37.37 
 
 
384 aa  231  1e-59  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  35.58 
 
 
380 aa  231  1e-59  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  37.37 
 
 
385 aa  231  1e-59  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_009921  Franean1_2710  acyl-CoA dehydrogenase domain-containing protein  35.98 
 
 
395 aa  231  2e-59  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1816  acyl-CoA dehydrogenase-like protein  36.97 
 
 
429 aa  230  2e-59  Cupriavidus metallidurans CH34  Bacteria  normal  0.0196409  hitchhiker  0.006326 
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  37.6 
 
 
384 aa  230  3e-59  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_009921  Franean1_3930  acyl-CoA dehydrogenase domain-containing protein  36.36 
 
 
385 aa  230  3e-59  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0411302 
 
 
-
 
NC_004311  BRA1088  acyl-CoA dehydrogenase  36.07 
 
 
380 aa  230  4e-59  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0146  Acyl-CoA dehydrogenase  37.37 
 
 
384 aa  230  4e-59  Burkholderia sp. 383  Bacteria  normal  normal  0.273639 
 
 
-
 
NC_009718  Fnod_0585  acyl-CoA dehydrogenase domain-containing protein  35.13 
 
 
379 aa  229  4e-59  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  37.53 
 
 
384 aa  229  5e-59  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  37.53 
 
 
384 aa  229  5e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  36.44 
 
 
384 aa  228  1e-58  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  36.22 
 
 
384 aa  228  1e-58  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  36.39 
 
 
376 aa  227  2e-58  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1191  acyl-CoA dehydrogenase domain-containing protein  36.65 
 
 
386 aa  227  3e-58  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013440  Hoch_3775  acyl-CoA dehydrogenase domain protein  36.08 
 
 
386 aa  226  7e-58  Haliangium ochraceum DSM 14365  Bacteria  normal  0.212433  normal  0.155443 
 
 
-
 
NC_013922  Nmag_3415  acyl-CoA dehydrogenase domain protein  34.94 
 
 
414 aa  225  1e-57  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  36.04 
 
 
389 aa  225  1e-57  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  37.07 
 
 
398 aa  224  1e-57  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7441  acyl-CoA dehydrogenase domain protein  37.21 
 
 
388 aa  224  2e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2826  acyl-CoA dehydrogenase domain protein  34.19 
 
 
385 aa  224  3e-57  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2129  Acyl-CoA dehydrogenase  35.97 
 
 
386 aa  223  6e-57  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0260778 
 
 
-
 
NC_012792  Vapar_6218  acyl-CoA dehydrogenase domain protein  36.97 
 
 
390 aa  222  7e-57  Variovorax paradoxus S110  Bacteria  normal  0.823092  n/a   
 
 
-
 
NC_014165  Tbis_1804  butyryl-CoA dehydrogenase  35.88 
 
 
386 aa  222  9e-57  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1697  acyl-CoA dehydrogenase domain protein  36.83 
 
 
386 aa  221  9.999999999999999e-57  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0868604  normal 
 
 
-
 
NC_012918  GM21_1386  acyl-CoA dehydrogenase domain protein  34.19 
 
 
385 aa  222  9.999999999999999e-57  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  35.48 
 
 
379 aa  221  1.9999999999999999e-56  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_013946  Mrub_0264  acyl-CoA dehydrogenase domain-containing protein  34.96 
 
 
394 aa  221  1.9999999999999999e-56  Meiothermus ruber DSM 1279  Bacteria  normal  0.0644181  normal  0.99067 
 
 
-
 
NC_013743  Htur_2326  acyl-CoA dehydrogenase domain protein  35.34 
 
 
398 aa  221  1.9999999999999999e-56  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008255  CHU_3827  bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)  36.41 
 
 
379 aa  221  1.9999999999999999e-56  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  35.48 
 
 
379 aa  220  3e-56  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  34.29 
 
 
379 aa  220  3e-56  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  35.48 
 
 
379 aa  220  3e-56  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1179  acyl-CoA dehydrogenase-like protein  35.34 
 
 
392 aa  220  3e-56  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_2192  acyl-CoA dehydrogenase domain protein  37.76 
 
 
380 aa  220  3e-56  Anaeromyxobacter sp. K  Bacteria  normal  0.516178  n/a   
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  35.48 
 
 
379 aa  220  3.9999999999999997e-56  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_011831  Cagg_2382  acyl-CoA dehydrogenase domain protein  35.66 
 
 
389 aa  220  3.9999999999999997e-56  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2136  acyl-CoA dehydrogenase domain-containing protein  36.72 
 
 
380 aa  220  3.9999999999999997e-56  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.281355 
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  35.22 
 
 
379 aa  219  5e-56  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_009253  Dred_1490  butyryl-CoA dehydrogenase  34.64 
 
 
378 aa  219  5e-56  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  35.22 
 
 
379 aa  219  6e-56  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1782  butyryl-CoA dehydrogenase  35.37 
 
 
379 aa  219  6e-56  Desulfotomaculum reducens MI-1  Bacteria  normal  0.257154  n/a   
 
 
-
 
NC_010676  Bphyt_4179  acyl-CoA dehydrogenase domain protein  34.44 
 
 
381 aa  219  7e-56  Burkholderia phytofirmans PsJN  Bacteria  normal  0.011291  hitchhiker  0.000381045 
 
 
-
 
NC_011891  A2cp1_2281  acyl-CoA dehydrogenase domain protein  37.5 
 
 
380 aa  219  7e-56  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0847  acyl-CoA dehydrogenase domain-containing protein  37.63 
 
 
386 aa  219  7.999999999999999e-56  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  36.92 
 
 
381 aa  219  8.999999999999998e-56  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  35.6 
 
 
386 aa  219  8.999999999999998e-56  Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_009767  Rcas_0249  acyl-CoA dehydrogenase domain-containing protein  35.86 
 
 
383 aa  218  1e-55  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.538468  normal  0.417839 
 
 
-
 
NC_003910  CPS_0658  acyl-CoA dehydrogenase  36.08 
 
 
388 aa  218  2e-55  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  35.22 
 
 
379 aa  218  2e-55  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  34.96 
 
 
379 aa  217  2e-55  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_007517  Gmet_1710  Acyl-CoA dehydrogenase-like  32.99 
 
 
386 aa  218  2e-55  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.671564 
 
 
-
 
NC_010515  Bcenmc03_4760  acyl-CoA dehydrogenase domain-containing protein  36.6 
 
 
384 aa  217  2e-55  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.661706 
 
 
-
 
NC_008543  Bcen2424_5512  acyl-CoA dehydrogenase domain-containing protein  36.6 
 
 
384 aa  218  2e-55  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  35.14 
 
 
380 aa  217  2.9999999999999998e-55  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS01762  putative acyl-CoA dehydrogenase oxidoreductase protein  37.08 
 
 
385 aa  217  2.9999999999999998e-55  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.272038 
 
 
-
 
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