More than 300 homologs were found in PanDaTox collection
for query gene Phep_3274 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013061  Phep_3274  short-chain dehydrogenase/reductase SDR  100 
 
 
233 aa  473  1e-132  Pedobacter heparinus DSM 2366  Bacteria  normal  0.883465  normal  0.897297 
 
 
-
 
NC_014230  CA2559_05445  oxidoreductase, short-chain dehydrogenase/reductase family protein  46.35 
 
 
227 aa  197  1.0000000000000001e-49  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0453  short-chain dehydrogenase/reductase SDR  45.06 
 
 
225 aa  186  2e-46  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_1925  short-chain dehydrogenase/reductase SDR  42.92 
 
 
225 aa  179  4.999999999999999e-44  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.452035  n/a   
 
 
-
 
BN001308  ANIA_00179  oxidoreductase, short chain dehydrogenase/reductase family (AFU_orthologue; AFUA_5G11240)  37.32 
 
 
313 aa  108  6e-23  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.983253  normal 
 
 
-
 
NC_014165  Tbis_2524  short-chain dehydrogenase/reductase SDR  33.06 
 
 
254 aa  108  6e-23  Thermobispora bispora DSM 43833  Bacteria  normal  0.16188  normal 
 
 
-
 
BN001308  ANIA_00618  conserved hypothetical protein  34.56 
 
 
268 aa  107  2e-22  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.767704 
 
 
-
 
NC_008148  Rxyl_0016  short-chain dehydrogenase/reductase SDR  38.02 
 
 
260 aa  107  2e-22  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4573  short-chain dehydrogenase/reductase SDR  37.22 
 
 
280 aa  101  1e-20  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_2089  short-chain dehydrogenase/reductase SDR  32.08 
 
 
246 aa  100  2e-20  Clostridium cellulolyticum H10  Bacteria  normal  0.0163129  n/a   
 
 
-
 
NC_013922  Nmag_1126  short-chain dehydrogenase/reductase SDR  34.67 
 
 
338 aa  99  6e-20  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_010623  Bphy_3982  short-chain dehydrogenase/reductase SDR  33.94 
 
 
287 aa  97.4  2e-19  Burkholderia phymatum STM815  Bacteria  hitchhiker  0.000201148  normal 
 
 
-
 
NC_009068  PICST_80053  NADP(+)-dependent dehydrogenase acts on serine, L-allo-threonine, and other 3-hydroxy acids  34.27 
 
 
269 aa  97.1  2e-19  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  33.33 
 
 
264 aa  96.7  3e-19  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_4120  short-chain dehydrogenase/reductase SDR  32.99 
 
 
250 aa  96.3  4e-19  Serratia proteamaculans 568  Bacteria  normal  0.323528  normal 
 
 
-
 
NC_007951  Bxe_A2202  short chain dehydrogenase  37.04 
 
 
276 aa  95.9  4e-19  Burkholderia xenovorans LB400  Bacteria  normal  0.516821  decreased coverage  0.00204142 
 
 
-
 
NC_008009  Acid345_2502  short-chain dehydrogenase/reductase SDR  35.08 
 
 
279 aa  96.3  4e-19  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.729969 
 
 
-
 
NC_008146  Mmcs_2653  short-chain dehydrogenase/reductase SDR  33.64 
 
 
250 aa  96.3  4e-19  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2698  short-chain dehydrogenase/reductase SDR  33.64 
 
 
250 aa  96.3  4e-19  Mycobacterium sp. KMS  Bacteria  normal  0.604698  normal  0.0177772 
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  32.7 
 
 
264 aa  95.5  6e-19  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2683  short-chain dehydrogenase/reductase SDR  33.64 
 
 
250 aa  95.5  6e-19  Mycobacterium sp. JLS  Bacteria  normal  0.138806  normal 
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  33.65 
 
 
264 aa  95.1  7e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
BN001308  ANIA_09378  conserved hypothetical protein  34.12 
 
 
282 aa  94.4  1e-18  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.141306 
 
 
-
 
NC_013744  Htur_3779  short-chain dehydrogenase/reductase SDR  37.44 
 
 
266 aa  94.4  1e-18  Haloterrigena turkmenica DSM 5511  Archaea  hitchhiker  0.00111461  n/a   
 
 
-
 
NC_008254  Meso_2942  short chain dehydrogenase  36.17 
 
 
280 aa  94.7  1e-18  Chelativorans sp. BNC1  Bacteria  normal  0.976984  n/a   
 
 
-
 
NC_011365  Gdia_2810  short-chain dehydrogenase/reductase SDR  35.11 
 
 
284 aa  93.6  2e-18  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.329601  normal 
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  33.18 
 
 
264 aa  94  2e-18  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013743  Htur_0997  short-chain dehydrogenase/reductase SDR  33.85 
 
 
260 aa  94  2e-18  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  32.23 
 
 
264 aa  93.2  3e-18  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2596  Short-chain dehydrogenase/reductase SDR  35.6 
 
 
287 aa  93.2  3e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  0.7335  normal 
 
 
-
 
NC_009832  Spro_0398  short-chain dehydrogenase/reductase SDR  34.18 
 
 
250 aa  93.2  3e-18  Serratia proteamaculans 568  Bacteria  normal  normal  0.199701 
 
 
-
 
NC_008527  LACR_0069  Short-chain dehydrogenase of various substrate specificities  33.51 
 
 
277 aa  93.2  3e-18  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.367303  n/a   
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  32.7 
 
 
264 aa  92.8  4e-18  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  32.7 
 
 
264 aa  92.8  4e-18  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1840  short-chain dehydrogenase/reductase SDR  32.74 
 
 
279 aa  92.8  4e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  0.205485  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  32.7 
 
 
264 aa  92.8  4e-18  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0694  short-chain dehydrogenase/reductase SDR  35.75 
 
 
255 aa  92.4  5e-18  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3127  short-chain dehydrogenase/reductase SDR  35.6 
 
 
253 aa  92  6e-18  Pseudomonas putida W619  Bacteria  normal  0.984455  normal 
 
 
-
 
NC_010501  PputW619_2735  short-chain dehydrogenase/reductase SDR  35.6 
 
 
253 aa  92.4  6e-18  Pseudomonas putida W619  Bacteria  normal  normal  0.534255 
 
 
-
 
NC_010681  Bphyt_2007  short chain dehydrogenase  34.43 
 
 
276 aa  92  7e-18  Burkholderia phytofirmans PsJN  Bacteria  normal  0.372157  normal  0.691247 
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  32.39 
 
 
264 aa  91.3  1e-17  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  34.11 
 
 
264 aa  91.3  1e-17  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_0911  short chain dehydrogenase  31.58 
 
 
242 aa  90.5  2e-17  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_1650  short-chain dehydrogenase/reductase SDR  31.78 
 
 
254 aa  90.9  2e-17  Cyanothece sp. PCC 7425  Bacteria  normal  0.206138  normal 
 
 
-
 
NC_013161  Cyan8802_0938  short chain dehydrogenase  32.47 
 
 
242 aa  90.1  2e-17  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009954  Cmaq_1385  short-chain dehydrogenase/reductase SDR  34.76 
 
 
248 aa  90.1  2e-17  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
NC_009436  Ent638_2515  short-chain dehydrogenase/reductase SDR  37.76 
 
 
247 aa  90.5  2e-17  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2798  short-chain dehydrogenase/reductase SDR  33.85 
 
 
235 aa  90.5  2e-17  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4818  short-chain dehydrogenase/reductase SDR  31.77 
 
 
256 aa  90.1  3e-17  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0123285 
 
 
-
 
NC_013132  Cpin_4842  short-chain dehydrogenase/reductase SDR  29.34 
 
 
249 aa  90.1  3e-17  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00384997  hitchhiker  0.000208801 
 
 
-
 
NC_008726  Mvan_1624  short-chain dehydrogenase/reductase SDR  31.77 
 
 
256 aa  90.1  3e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0419778 
 
 
-
 
NC_002976  SERP2049  short chain dehydrogenase/reductase family oxidoreductase  31.96 
 
 
230 aa  89.4  4e-17  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1025  short chain dehydrogenase  33.68 
 
 
274 aa  89.4  4e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.150864  normal  0.667254 
 
 
-
 
NC_003909  BCE_2806  short chain dehydrogenase  32.29 
 
 
291 aa  89.4  4e-17  Bacillus cereus ATCC 10987  Bacteria  normal  0.928497  n/a   
 
 
-
 
NC_009441  Fjoh_1994  short-chain dehydrogenase/reductase SDR  31.15 
 
 
245 aa  89.4  4e-17  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0608  short-chain dehydrogenase/reductase SDR  35.26 
 
 
251 aa  89.4  4e-17  Thermotoga sp. RQ2  Bacteria  normal  0.236394  n/a   
 
 
-
 
NC_009486  Tpet_0594  short-chain dehydrogenase/reductase SDR  35.26 
 
 
251 aa  89.4  4e-17  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000426585  n/a   
 
 
-
 
NC_013757  Gobs_0738  short-chain dehydrogenase/reductase SDR  31.88 
 
 
249 aa  89.4  4e-17  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.964587  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  31.75 
 
 
264 aa  89.4  5e-17  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_010512  Bcenmc03_6423  short-chain dehydrogenase/reductase SDR  33.84 
 
 
244 aa  89  6e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007950  Bpro_5564  short-chain dehydrogenase/reductase SDR  40.94 
 
 
250 aa  89  6e-17  Polaromonas sp. JS666  Bacteria  normal  0.0387947  normal 
 
 
-
 
NC_014248  Aazo_3368  short-chain dehydrogenase/reductase SDR  35.26 
 
 
241 aa  88.6  7e-17  'Nostoc azollae' 0708  Bacteria  normal  0.119808  n/a   
 
 
-
 
NC_010515  Bcenmc03_4865  short-chain dehydrogenase/reductase SDR  32.69 
 
 
291 aa  88.6  8e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.321588  normal 
 
 
-
 
NC_013595  Sros_2081  short-chain dehydrogenase/reductase SDR  28.86 
 
 
260 aa  88.6  8e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.379733  normal  0.717658 
 
 
-
 
NC_013730  Slin_2186  short-chain dehydrogenase/reductase SDR  34.72 
 
 
248 aa  88.6  8e-17  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0361624 
 
 
-
 
NC_010087  Bmul_6101  short-chain dehydrogenase/reductase SDR  32.11 
 
 
285 aa  88.6  8e-17  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_5457  short-chain dehydrogenase/reductase SDR  32.69 
 
 
291 aa  88.6  8e-17  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1526  short-chain dehydrogenase/reductase SDR  32.63 
 
 
254 aa  88.6  8e-17  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5405  short-chain dehydrogenase/reductase SDR  32.69 
 
 
291 aa  88.6  8e-17  Burkholderia cenocepacia HI2424  Bacteria  normal  0.403602  normal  0.010149 
 
 
-
 
NC_013501  Rmar_2639  short-chain dehydrogenase/reductase SDR  29.74 
 
 
238 aa  88.2  9e-17  Rhodothermus marinus DSM 4252  Bacteria  normal  0.37123  n/a   
 
 
-
 
NC_009664  Krad_1946  short-chain dehydrogenase/reductase SDR  32.02 
 
 
299 aa  88.2  9e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  29.69 
 
 
236 aa  87.8  1e-16  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_013205  Aaci_0951  short-chain dehydrogenase/reductase SDR  33.33 
 
 
261 aa  87.8  1e-16  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2206  short-chain dehydrogenase/reductase SDR  31.39 
 
 
276 aa  88.2  1e-16  Pseudomonas mendocina ymp  Bacteria  normal  0.56422  normal  0.0351935 
 
 
-
 
NC_010622  Bphy_0342  short-chain dehydrogenase/reductase SDR  32.45 
 
 
247 aa  87.8  1e-16  Burkholderia phymatum STM815  Bacteria  normal  0.973802  normal 
 
 
-
 
NC_009077  Mjls_2812  short-chain dehydrogenase/reductase SDR  33.47 
 
 
255 aa  88.2  1e-16  Mycobacterium sp. JLS  Bacteria  normal  0.199732  normal 
 
 
-
 
NC_010172  Mext_1326  short-chain dehydrogenase/reductase SDR  33.33 
 
 
254 aa  87.8  1e-16  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.393683 
 
 
-
 
NC_011666  Msil_3366  short-chain dehydrogenase/reductase SDR  33.51 
 
 
250 aa  87.8  1e-16  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008705  Mkms_2829  short-chain dehydrogenase/reductase SDR  33.47 
 
 
255 aa  87.8  1e-16  Mycobacterium sp. KMS  Bacteria  normal  0.150517  normal  0.215397 
 
 
-
 
NC_010184  BcerKBAB4_2582  short chain dehydrogenase  32.29 
 
 
291 aa  87.8  1e-16  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0166341  n/a   
 
 
-
 
NC_008146  Mmcs_2785  short-chain dehydrogenase/reductase SDR  33.47 
 
 
255 aa  87.8  1e-16  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_36870  putative short-chain dehydrogenase  29.53 
 
 
286 aa  88.2  1e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1698  short-chain dehydrogenase/reductase SDR  34.39 
 
 
298 aa  87.8  1e-16  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_0498  short-chain dehydrogenase/reductase SDR  35.32 
 
 
273 aa  87.8  1e-16  Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.000000406118  n/a   
 
 
-
 
NC_011884  Cyan7425_3474  short-chain dehydrogenase/reductase SDR  28.81 
 
 
285 aa  87.4  2e-16  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.345409 
 
 
-
 
NC_007204  Psyc_1299  fatty acyl-CoA reductase protein  32.65 
 
 
295 aa  87  2e-16  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_3205  short-chain dehydrogenase/reductase SDR  31.25 
 
 
244 aa  87.4  2e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2139  short chain dehydrogenase  31.84 
 
 
284 aa  87  2e-16  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.980351 
 
 
-
 
NC_008146  Mmcs_1253  short-chain dehydrogenase/reductase SDR  31.05 
 
 
256 aa  87  2e-16  Mycobacterium sp. MCS  Bacteria  normal  0.224395  n/a   
 
 
-
 
NC_012918  GM21_2843  short-chain dehydrogenase/reductase SDR  34.21 
 
 
255 aa  87  2e-16  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010501  PputW619_2737  short-chain dehydrogenase/reductase SDR  35.57 
 
 
245 aa  87.4  2e-16  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3113  short-chain dehydrogenase/reductase SDR  32.63 
 
 
256 aa  87  2e-16  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000552143 
 
 
-
 
NC_008705  Mkms_1270  short-chain dehydrogenase/reductase SDR  31.05 
 
 
256 aa  87  2e-16  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1468  short-chain dehydrogenase/reductase SDR  32.63 
 
 
277 aa  87  2e-16  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.875416  normal 
 
 
-
 
NC_008463  PA14_46420  short chain dehydrogenase  33.68 
 
 
277 aa  87  2e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000350021  hitchhiker  0.000971378 
 
 
-
 
NC_009077  Mjls_1280  short-chain dehydrogenase/reductase SDR  31.05 
 
 
256 aa  87.4  2e-16  Mycobacterium sp. JLS  Bacteria  normal  0.367673  normal  0.166116 
 
 
-
 
NC_008532  STER_0433  3-ketoacyl-(acyl-carrier-protein) reductase  30.54 
 
 
244 aa  87  2e-16  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00087459  n/a   
 
 
-
 
NC_013595  Sros_2237  short-chain dehydrogenase/reductase SDR  34.63 
 
 
252 aa  87.4  2e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.635702  normal  0.434149 
 
 
-
 
NC_006274  BCZK2507  short chain dehydrogenase  29.69 
 
 
291 aa  86.7  3e-16  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0460  short chain dehydrogenase  29.41 
 
 
291 aa  86.7  3e-16  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
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