Gene CA2559_05445 details

Gene Information

• Locus tag: CA2559_05445
• ID: 9296582
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: -
• Start bp: 1225630
• End bp: 1226313
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 34%
• Product: oxidoreductase, short-chain dehydrogenase/reductase family protein
• Protein accession: YP_003715852
• Protein GI: 298207673

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACACA TAATAATTAC TGGCGCAAGT AAAGGTATTG GCTTAGAGTT GGCAAAACTA 
TTTTCCATAC AAAATCACAA GGTTATTGCG CTATCTAGAA ACACATCTCA CCTTAAGTCT 
TTATCCCTAG ATAATGTTAC TTGTTTAGAT CTTGATATTA CAAAAGAAGA GCAAAACAAC 
ATTCTTAACA ATGCTATAAA AAATGTGTTT AATAATCGTG TAGACATATT AATAAACAAT 
GCAGGCCTGT TAGCAAATTC ATCTTTCAAC ACTACTTCTT TAGATACCTT TAAAAGTGTT 
TACAATACTA ATGTTTATGG AGTTGTAAAT ATGACCCAAC AAGCACTACC TTATATGAAC 
AACAAAAGCC ATGTTGTTAA TATAAGTAGT ATGGGCGGCA TACAAGGAAG TATGAAATTC 
GCAGGATTAT CTGCCTATAG TTCTAGCAAG GGTGCACTCA TTACATTAAC AGAGCTTTTA 
GCAGAAGAGT ATAAGGAAAC AGGACCGTCG TTTAATGTAT TGGCTTTAGG TGCTGTTCAA 
ACCGAAATGT TAGAGCAAGC TTTTCCTGGT TTTCAAGCTC CAGTAACTGC AGAAGAAATG 
GCAGAATATA TTGCTAATTT TGCTTTAACT GGACAACAGT TTTATAATGG AAAAATATTA 
CAGGTTTCAA GCACCACACC TTAA 

 

Protein sequence

MKHIIITGAS KGIGLELAKL FSIQNHKVIA LSRNTSHLKS LSLDNVTCLD LDITKEEQNN 
ILNNAIKNVF NNRVDILINN AGLLANSSFN TTSLDTFKSV YNTNVYGVVN MTQQALPYMN 
NKSHVVNISS MGGIQGSMKF AGLSAYSSSK GALITLTELL AEEYKETGPS FNVLALGAVQ 
TEMLEQAFPG FQAPVTAEEM AEYIANFALT GQQFYNGKIL QVSSTTP