Gene Bxe_A2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A2202 
Symbol 
ID4004564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp2485059 
End bp2485889 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content66% 
IMG OID637947438 
Productshort chain dehydrogenase 
Protein accessionYP_558819 
Protein GI91783613 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.516821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00204142 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCAAAA CGTTTCTGAT CACCGGCGTC AGTTCCGGCT TCGGCCAGGC ATTCGCGCAG 
GCGGCGCTCG ACGCGGGCCA TACCGTCGTC GGCACGGTGC GCAATGAAGC CGCGCGCAGC
GCGTTCGAGG CGCTAGCCGC CGAACGGGCC CACGCCATCG TGCTCGACGT GACGCAATTC
GATGCCATCG CGCCCGCCGT CGCCGCGATC ACGCAAACCG TCGGGCCGAT CGACGTGCTC
GTCAACAACG CCGGCTACGG GCACGAAGGC ACGCTGGAAG AGTCGCCGCT CGACGATCTG
CGCCGGCAAT TCGACGTCAA CGTGTTCGGC GCGGTGGCGA TGATCAAGGC CGTGCTGCCC
GCCATGCGCG AGCGCCGCTC GGGACACATC ATCAACATCA CGTCGATGGG CGGCTTCATC
ACGATGCCCG GCATTGCGTA CTATTGCGGC AGCAAGTTCG CGCTCGAAGG CATCACCGAA
ACGCTGGCGA AGGAAGTGGC GGGCTTCGGC ATCAAGGTGA CCGCGGTCGC GCCCGGCTCG
TTTCGTACCG ATTGGGCCGG CCGCTCGATG GTTCGCGCAG GCCGCAGCAT CTCCGACTAC
GACGCCCTCT TCGACCCGAT CCGCGAAGCG CGCGAAACGA AGAGCGGCAA GCAGGCCGGC
GACCCGCGCA AAGCGGCTCA GGCGCTGCTC GCGATCGTCG CCGCGAACAA TCCGCCGGTG
CATCTGCTGC TCGGCAACGA CGCGTTCGAT CTGGTGAAAA CAAAACTGGC CGCACTGGGC
GCGGAGATCG ACGCGTGGGA AGCGCTGTCG CGTTCGACCG ACTTCGCATG A
 
Protein sequence
MSKTFLITGV SSGFGQAFAQ AALDAGHTVV GTVRNEAARS AFEALAAERA HAIVLDVTQF 
DAIAPAVAAI TQTVGPIDVL VNNAGYGHEG TLEESPLDDL RRQFDVNVFG AVAMIKAVLP
AMRERRSGHI INITSMGGFI TMPGIAYYCG SKFALEGITE TLAKEVAGFG IKVTAVAPGS
FRTDWAGRSM VRAGRSISDY DALFDPIREA RETKSGKQAG DPRKAAQALL AIVAANNPPV
HLLLGNDAFD LVKTKLAALG AEIDAWEALS RSTDFA