| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3127 |
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| Symbol | |
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| ID | 6112077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3464649 |
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| End bp | 3465410 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641622912 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001749986 |
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| Protein GI | 170722298 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.984455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACT TCATCCCAAC CCCAAACGAA GTGGCAGGCA AAGTGGTGCT GGTAACCGGC
GCGGCTAGCG GCATCGGGAA GGCCATCGCC GAGCTCCTTC ACAGCCGTGG AGCGAAAGTC
ATTGCCGAGG ATATCGACCC GAAAGTCAAC GCCCTTGAGC GTCCCGGCCT GGTTCCTTTC
GTCGCCGATA TCACCGTTGA CGGTTCTGCC GAGCAAGCGG TGGCGTTGGC GGTAGAGAAG
TTTGGCAAGC TGGACGTCCT GGTCAATAAC GCCGGTCGCA TCCTATACAA GCCCCTCGTC
GAAATGACCC GTGAAGATTG GGAATGGCAG ATGCAAACCA ACGTGACGGG GGCGTTTCTT
CATTCCCGAG AGGCGATGAA GGAGATGATG AAGAACAAGA GCGGCGCGAT CGTGAACATC
GCCTCGTACG CGTCCTACTA CGCATTTCCC GGTATCGCGG CCTATACCGC GTCCAAAGGC
GCATTAGCAC AGTTGACTCG TACCCAGGCA CTGGAAGCGA TTGAGCATGG CATTCGGGTC
AATGCCATTG GCGTGGGAGA TGTGGTTACC AACCTGTTGA ACCATTTCAT GGAAGACGGT
CGTGGGTTCC TGCAAGAGCA TGGCAAGTCC GCGCCGATCG GTCGAGCTGC AGCACCGGAA
GAGATCCCCG AGATTGTCTC CTTCCTGGCT TCCGAGCGCG CCAGCTTCAT TGTCGGTTCG
GTGGTCATGG CCGATGGCGG CATGAGCGTC CCGGTAGGTT AA
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| Protein sequence | MTDFIPTPNE VAGKVVLVTG AASGIGKAIA ELLHSRGAKV IAEDIDPKVN ALERPGLVPF
VADITVDGSA EQAVALAVEK FGKLDVLVNN AGRILYKPLV EMTREDWEWQ MQTNVTGAFL
HSREAMKEMM KNKSGAIVNI ASYASYYAFP GIAAYTASKG ALAQLTRTQA LEAIEHGIRV
NAIGVGDVVT NLLNHFMEDG RGFLQEHGKS APIGRAAAPE EIPEIVSFLA SERASFIVGS
VVMADGGMSV PVG
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