| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1253 |
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| Symbol | |
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| ID | 4110090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | + |
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| Start bp | 1356546 |
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| End bp | 1357316 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638030374 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_638421 |
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| Protein GI | 108798224 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.224395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGCG CGAAGTTCGA CCGACTCTTC GATCTGACCG GCCGCACCGC CGTCGTCACC
GGCGGCACCC GCGGTATCGG TCTCGCGCTC GCCGAGGGTT TCGCGCTGGC CGGCGCCCGG
GTGGTGGTCG CCAGTCGCAA GCCCGACGCC TGTGAACGCG CCGCCGAGCA TCTGCGCGGG
CTCGGCGCAC AGGCTGTCGG CGTCCCCACC CACCTCGGGG ACATCGACGC GCTCGAGGCG
CTGGTCACCC GCACCGTCGA GGAGTTCGGC GGCATCGACG TGTTGGTGAA CAACGCCGCG
AACGCGCTGG CGCAACCGCT GGGGGAGATG ACGCCCGAGG CGTGGACGAA GTCCTACGAC
GTCAACCTGC GCGGCCCGGT GTTCCTCGTA CAGCACGCGC TGCCGCACCT GAAGGCCAGC
GCGCACGCCG CGGTCCTGAA CACGGTGTCG GTGGGCGCGT TCAACTTCGC GCCGAACGTG
TCGATGTACG CCGCGGGCAA GGCGGCGCTG CTGTCGTTCA CCCGGTCGAT GGCCGCTGCC
TACGCGCCGT ACGGCATCCG CGTGAACGCG CTGGCGCCCG GCCCCGTCGA CACCGACATG
ATGCGCAACA ATTCGCAGGA GGCAATCGAC GCGATGGCCG GGGCCACGCT GATGAACCGG
TTGGCATCAC CGGACGAAAT GGTCGGCGCC GCACTGTTGT TGGTCTCCGA CGCCGGCAGC
TACCTGACCG GTCAGGCGAT CATCGTGGAC GGTGGCGGAA CGCCTCGCTA G
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| Protein sequence | MDRAKFDRLF DLTGRTAVVT GGTRGIGLAL AEGFALAGAR VVVASRKPDA CERAAEHLRG
LGAQAVGVPT HLGDIDALEA LVTRTVEEFG GIDVLVNNAA NALAQPLGEM TPEAWTKSYD
VNLRGPVFLV QHALPHLKAS AHAAVLNTVS VGAFNFAPNV SMYAAGKAAL LSFTRSMAAA
YAPYGIRVNA LAPGPVDTDM MRNNSQEAID AMAGATLMNR LASPDEMVGA ALLLVSDAGS
YLTGQAIIVD GGGTPR
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