More than 300 homologs were found in PanDaTox collection
for query gene Mbar_A0233 on replicon NC_007355
Organism: Methanosarcina barkeri str. Fusaro



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007355  Mbar_A0233  glucose-1-phosphate thymidylyltransferase  100 
 
 
240 aa  491  9.999999999999999e-139  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.00581179  normal  0.550087 
 
 
-
 
NC_011832  Mpal_2406  Nucleotidyl transferase  71.91 
 
 
239 aa  367  1e-101  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009051  Memar_0188  nucleotidyl transferase  68.75 
 
 
244 aa  357  9.999999999999999e-98  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007955  Mbur_2230  nucleotidyl transferase  70.51 
 
 
235 aa  350  1e-95  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_012034  Athe_0054  Nucleotidyl transferase  61.16 
 
 
243 aa  301  7.000000000000001e-81  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4141  Nucleotidyl transferase  58.95 
 
 
253 aa  276  2e-73  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.0000020886 
 
 
-
 
NC_010184  BcerKBAB4_1122  nucleotidyl transferase  56.17 
 
 
245 aa  276  2e-73  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.236297  n/a   
 
 
-
 
NC_003909  BCE_1335  glucose-1-phosphate thymidylyltransferase, putative  55.32 
 
 
245 aa  273  2.0000000000000002e-72  Bacillus cereus ATCC 10987  Bacteria  normal  0.161343  n/a   
 
 
-
 
NC_005945  BAS1135  glucose-1-phosphate thymidylyltransferase  54.69 
 
 
245 aa  272  3e-72  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1228  glucose-1-phosphate thymidylyltransferase  54.69 
 
 
245 aa  272  3e-72  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1109  glucose-1-phosphate thymidylyltransferase  54.29 
 
 
245 aa  270  1e-71  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1296  putative glucose-1-phosphate thymidylyltransferase  54.29 
 
 
245 aa  269  2e-71  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00103191 
 
 
-
 
NC_011725  BCB4264_A1267  putative glucose-1-phosphate thymidylyltransferase  54.04 
 
 
245 aa  268  5e-71  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1115  glucose-1-phosphate thymidylyltransferase  53.88 
 
 
245 aa  268  5.9999999999999995e-71  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4074  putative glucose-1-phosphate thymidylyltransferase  54.04 
 
 
245 aa  268  5.9999999999999995e-71  Bacillus cereus G9842  Bacteria  normal  0.859637  normal 
 
 
-
 
NC_011658  BCAH187_A1373  putative glucose-1-phosphate thymidylyltransferase  53.88 
 
 
245 aa  267  1e-70  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0937  nucleotidyl transferase  54.74 
 
 
257 aa  264  8e-70  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1351  Nucleotidyl transferase  51.05 
 
 
257 aa  256  2e-67  Rhodothermus marinus DSM 4252  Bacteria  normal  0.397002  n/a   
 
 
-
 
NC_007796  Mhun_3107  nucleotidyl transferase  51.06 
 
 
246 aa  245  6e-64  Methanospirillum hungatei JF-1  Archaea  normal  0.655372  normal  0.0467455 
 
 
-
 
NC_013512  Sdel_1786  glucose-1-phosphate thymidylyltransferase  51.05 
 
 
292 aa  232  4.0000000000000004e-60  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_13103  glucose-1-phosphate thymidylyltransferase  50.42 
 
 
286 aa  231  6e-60  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1224  glucose-1-phosphate thymidyl transferase  48.18 
 
 
289 aa  231  1e-59  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3038  glucose-1-phosphate thymidylyltransferase  50.64 
 
 
292 aa  227  1e-58  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1798  glucose-1-phosphate thymidylyltransferase  49.79 
 
 
287 aa  227  1e-58  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2896  glucose-1-phosphate thymidylyltransferase  48.95 
 
 
288 aa  227  2e-58  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.257197 
 
 
-
 
NC_008345  Sfri_2829  glucose-1-phosphate thymidylyltransferase  48.12 
 
 
289 aa  224  6e-58  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0574416  n/a   
 
 
-
 
NC_013730  Slin_5841  glucose-1-phosphate thymidylyltransferase  48.1 
 
 
286 aa  224  7e-58  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.572504 
 
 
-
 
NC_004116  SAG1200  glucose-1-phosphate thymidylyltransferase  46.15 
 
 
289 aa  224  1e-57  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1752  glucose-1-phosphate thymidylyltransferase  48.36 
 
 
297 aa  224  1e-57  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.2486 
 
 
-
 
NC_013422  Hneap_1491  glucose-1-phosphate thymidylyltransferase  49.58 
 
 
290 aa  224  1e-57  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1753  glucose-1-phosphate thymidylyltransferase  50.85 
 
 
301 aa  223  2e-57  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008700  Sama_2240  glucose-1-phosphate thymidylyltransferase  47.48 
 
 
305 aa  222  3e-57  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.572666 
 
 
-
 
NC_008709  Ping_3464  glucose-1-phosphate thymidylyltransferase  48.95 
 
 
293 aa  223  3e-57  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.349025 
 
 
-
 
NC_007954  Sden_2662  glucose-1-phosphate thymidylyltransferase  48.12 
 
 
289 aa  222  4e-57  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0200  glucose-1-phosphate thymidylyltransferase  46.15 
 
 
289 aa  222  4e-57  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.310491  n/a   
 
 
-
 
NC_008751  Dvul_2059  glucose-1-phosphate thymidylyltransferase  47.48 
 
 
302 aa  222  4.9999999999999996e-57  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.384582 
 
 
-
 
NC_008531  LEUM_1423  glucose-1-phosphate thymidylyltransferase  45.42 
 
 
291 aa  221  7e-57  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0331  glucose-1-phosphate thymidylyltransferase  48.54 
 
 
291 aa  221  7e-57  Flavobacterium johnsoniae UW101  Bacteria  normal  0.284071  n/a   
 
 
-
 
NC_009438  Sputcn32_2539  glucose-1-phosphate thymidylyltransferase  48.33 
 
 
289 aa  221  8e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2131  glucose-1-phosphate thymidylyltransferase  48.95 
 
 
297 aa  221  9.999999999999999e-57  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1473  glucose-1-phosphate thymidylyltransferase  47.28 
 
 
287 aa  220  1.9999999999999999e-56  Shewanella baltica OS223  Bacteria  normal  0.905305  normal  0.376761 
 
 
-
 
NC_009092  Shew_1402  glucose-1-phosphate thymidylyltransferase  47.28 
 
 
291 aa  219  1.9999999999999999e-56  Shewanella loihica PV-4  Bacteria  normal  decreased coverage  0.00196644 
 
 
-
 
NC_013216  Dtox_4130  glucose-1-phosphate thymidylyltransferase  46.67 
 
 
294 aa  219  3e-56  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.000000069205 
 
 
-
 
NC_007514  Cag_0512  glucose-1-phosphate thymidylyltransferase, long form  47.77 
 
 
295 aa  219  3.9999999999999997e-56  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3810  glucose-1-phosphate thymidylyltransferase  47.7 
 
 
292 aa  218  5e-56  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1570  dTDP-glucose pyrophosphorylase  48.54 
 
 
298 aa  218  5e-56  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1399  glucose-1-phosphate thymidylyltransferase  47.68 
 
 
290 aa  218  5e-56  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0244  glucose-1-phosphate thymidylyltransferase RmlA  48.33 
 
 
294 aa  218  7e-56  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0179  glucose-1-phosphate thymidylyltransferase RmlA  48.33 
 
 
294 aa  218  7e-56  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2083  glucose-1-phosphate thymidylyltransferase  51.71 
 
 
300 aa  218  7.999999999999999e-56  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2464  glucose-1-phosphate thymidylyltransferase  49.15 
 
 
301 aa  218  8.999999999999998e-56  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.0000102414  n/a   
 
 
-
 
NC_010002  Daci_1277  glucose-1-phosphate thymidylyltransferase  46.61 
 
 
296 aa  218  8.999999999999998e-56  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_4022  glucose-1-phosphate thymidylyltransferase  47.26 
 
 
286 aa  217  1e-55  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1238  glucose-1-phosphate thymidylyltransferase  46.61 
 
 
296 aa  217  1e-55  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.981269 
 
 
-
 
NC_010483  TRQ2_0303  glucose-1-phosphate thymidylyltransferase  47.54 
 
 
298 aa  217  1e-55  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3681  glucose-1-phosphate thymidylyltransferase  48.93 
 
 
293 aa  217  1e-55  Clostridium phytofermentans ISDg  Bacteria  normal  0.0233159  n/a   
 
 
-
 
NC_009997  Sbal195_3029  glucose-1-phosphate thymidylyltransferase  47.54 
 
 
291 aa  217  1e-55  Shewanella baltica OS195  Bacteria  normal  normal  0.173381 
 
 
-
 
NC_008255  CHU_3390  glucose-1-phosphate thymidylyltransferase  46.84 
 
 
288 aa  217  1e-55  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.105005 
 
 
-
 
NC_008609  Ppro_2548  glucose-1-phosphate thymidylyltransferase  48.73 
 
 
299 aa  217  1e-55  Pelobacter propionicus DSM 2379  Bacteria  normal  0.257224  n/a   
 
 
-
 
NC_011312  VSAL_I3019  glucose-1-phosphate thymidyl transferase  48.12 
 
 
295 aa  217  2e-55  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.313086  n/a   
 
 
-
 
NC_011080  SNSL254_A2277  glucose-1-phosphate thymidylyltransferase  46.19 
 
 
294 aa  216  2e-55  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000000187637 
 
 
-
 
NC_011149  SeAg_B2220  glucose-1-phosphate thymidylyltransferase  46.19 
 
 
294 aa  216  2e-55  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.281714  n/a   
 
 
-
 
NC_009052  Sbal_2889  glucose-1-phosphate thymidylyltransferase  47.5 
 
 
286 aa  217  2e-55  Shewanella baltica OS155  Bacteria  normal  0.4055  n/a   
 
 
-
 
NC_009654  Mmwyl1_0838  glucose-1-phosphate thymidylyltransferase  47.7 
 
 
293 aa  216  2.9999999999999998e-55  Marinomonas sp. MWYL1  Bacteria  normal  0.22071  normal 
 
 
-
 
NC_009483  Gura_2862  glucose-1-phosphate thymidylyltransferase  49.57 
 
 
301 aa  216  2.9999999999999998e-55  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000105024  n/a   
 
 
-
 
NC_010622  Bphy_2318  glucose-1-phosphate thymidylyltransferase  46.09 
 
 
297 aa  216  2.9999999999999998e-55  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_008576  Mmc1_1406  glucose-1-phosphate thymidylyltransferase  44.53 
 
 
290 aa  216  2.9999999999999998e-55  Magnetococcus sp. MC-1  Bacteria  normal  0.0680028  normal 
 
 
-
 
NC_007204  Psyc_1214  glucose-1-phosphate thymidylyltransferase  47.48 
 
 
296 aa  216  4e-55  Psychrobacter arcticus 273-4  Bacteria  normal  0.942362  decreased coverage  0.00289209 
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  47.03 
 
 
292 aa  216  4e-55  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2330  glucose-1-phosphate thymidylyltransferase  47.03 
 
 
292 aa  216  4e-55  Escherichia coli E24377A  Bacteria  normal  0.0550352  n/a   
 
 
-
 
NC_008782  Ajs_0539  glucose-1-phosphate thymidylyltransferase  47.46 
 
 
294 aa  216  4e-55  Acidovorax sp. JS42  Bacteria  normal  0.911631  normal  0.057049 
 
 
-
 
NC_011083  SeHA_C2321  glucose-1-phosphate thymidylyltransferase  46.19 
 
 
294 aa  215  4e-55  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  decreased coverage  0.00736153 
 
 
-
 
NC_008347  Mmar10_2458  glucose-1-phosphate thymidylyltransferase  47.28 
 
 
291 aa  215  4e-55  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_008528  OEOE_1449  glucose-1-phosphate thymidylyltransferase  44.49 
 
 
291 aa  215  4e-55  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4472  glucose-1-phosphate thymidylyltransferase  48.54 
 
 
292 aa  215  4e-55  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0455332  n/a   
 
 
-
 
NC_011059  Paes_1726  glucose-1-phosphate thymidylyltransferase  47.77 
 
 
291 aa  215  5e-55  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.00000315653  normal  0.563962 
 
 
-
 
NC_004347  SO_3186  glucose-1-phosphate-thymidylyltransferase  47.48 
 
 
304 aa  215  5e-55  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007406  Nwi_0545  glucose-1-phosphate thymidylyltransferase, long form  49.16 
 
 
291 aa  215  5e-55  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.771831 
 
 
-
 
NC_008752  Aave_4164  glucose-1-phosphate thymidylyltransferase  47.46 
 
 
291 aa  215  5.9999999999999996e-55  Acidovorax citrulli AAC00-1  Bacteria  normal  0.375509  normal  0.0599581 
 
 
-
 
NC_008148  Rxyl_3121  glucose-1-phosphate thymidylyltransferase  47.28 
 
 
293 aa  214  7e-55  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2328  glucose-1-phosphate thymidylyltransferase  46.19 
 
 
294 aa  214  7e-55  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.196545 
 
 
-
 
CP001637  EcDH1_1618  glucose-1-phosphate thymidylyltransferase  46.61 
 
 
293 aa  214  8e-55  Escherichia coli DH1  Bacteria  normal  0.0952229  n/a   
 
 
-
 
NC_006368  lpp0826  glucose-1-phosphate thymidylyltransferase  47.86 
 
 
291 aa  214  8e-55  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0797  glucose-1-phosphate thymidylyltransferase  47.86 
 
 
291 aa  214  8e-55  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011205  SeD_A2435  glucose-1-phosphate thymidylyltransferase  45.76 
 
 
294 aa  214  8e-55  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0000704371 
 
 
-
 
NC_009436  Ent638_2652  glucose-1-phosphate thymidylyltransferase  47.06 
 
 
291 aa  214  8e-55  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  46.61 
 
 
292 aa  214  9e-55  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
NC_007969  Pcryo_0625  glucose-1-phosphate thymidylyltransferase  45.61 
 
 
290 aa  214  9e-55  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.150141 
 
 
-
 
CP001509  ECD_01945  glucose-1-phosphate thymidylyltransferase  46.61 
 
 
292 aa  214  9.999999999999999e-55  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3933  glucose-1-phosphate thymidylyltransferase  47.7 
 
 
296 aa  214  9.999999999999999e-55  Pseudomonas putida F1  Bacteria  normal  0.527502  normal  0.192647 
 
 
-
 
NC_004578  PSPTO_1079  glucose-1-phosphate thymidylyltransferase  47.7 
 
 
296 aa  214  9.999999999999999e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.857116  n/a   
 
 
-
 
NC_007517  Gmet_0924  glucose-1-phosphate thymidylyltransferase  49.57 
 
 
302 aa  213  9.999999999999999e-55  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_3075  glucose-1-phosphate thymidylyltransferase  47.98 
 
 
293 aa  214  9.999999999999999e-55  Methanospirillum hungatei JF-1  Archaea  normal  0.589168  normal  0.11788 
 
 
-
 
NC_007908  Rfer_2677  glucose-1-phosphate thymidylyltransferase  45.27 
 
 
292 aa  214  9.999999999999999e-55  Rhodoferax ferrireducens T118  Bacteria  normal  0.475432  n/a   
 
 
-
 
NC_012892  B21_01934  hypothetical protein  46.61 
 
 
270 aa  214  9.999999999999999e-55  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0541  glucose-1-phosphate thymidylyltransferase  45.15 
 
 
297 aa  213  1.9999999999999998e-54  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_001807  glucose-1-phosphate thymidylyltransferase  46.44 
 
 
293 aa  213  1.9999999999999998e-54  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0416  glucose-1-phosphate thymidylyltransferase, long form  46.96 
 
 
292 aa  213  1.9999999999999998e-54  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_2411  glucose-1-phosphate thymidylyltransferase  45.08 
 
 
290 aa  213  1.9999999999999998e-54  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000385967  n/a   
 
 
-
 
NC_013162  Coch_2130  glucose-1-phosphate thymidylyltransferase  45.75 
 
 
293 aa  213  2.9999999999999995e-54  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>