| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0233 |
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| Symbol | |
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| ID | 3626014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 274041 |
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| End bp | 274763 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637699125 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_303797 |
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| Protein GI | 73667782 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form
[TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00581179 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.550087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGCA TAATACTCGC AGGCGGTACT GGCAGCAGGC TTTATCCCCT GACTAAAGTT
ACAAATAAGC ACCTGTTGCC TGTCTATGAT AAACCAATGA TATTTTATCC CATCCAGACT
CTCGTTAACG CAGGCATCAA AGAAATAATG ATCGTATCCG GTCGAGGTCA TGCCGGACAT
TTTCTTGAGC TTCTGGGTTC AGGTGCAGAT ATAGGGGTTA AGTTTACTTA TGAAATTCAG
GAAGAAGCTG GAGGGATCGC ACAGGCTTTA GGTCTCGCAG AGCGTTTTGC TGATGAAGAA
GATGTGGCAG TAATCCTTGG GGACAATATT TTTCAGGATA ACATTAAAGA TGACGTCTCA
AACTTTACAG ATGGTGCCAA GATATTCTTA AAAGAAGTCC AGGATGCCCA CAGGTTTGGA
GTAGCTGAGC TTAAAGGTGA CAGGGTAATA GGAATACAGG AGAAACCTCG TGAACCCAAA
AGCAATTTTG CAGTTACCGG TCTTTATATA TACAGTAATA GTGTATTCGA AGTAGTCAAA
ACCCTTAAGC CTTCTGCGCG AGGAGAACTT GAGATAACTG ATGTCAATAA TTATTTTGTA
AATAATGGGA CTATGGAATA TCGAATTCTG GACGGTTTCT GGAGTGATGC AGGTACTTTT
GAGAGTTTAT TGAGAGCAGG GGTACTGATC CAGAACCATT GTAAAAACAA AAACGCGGAG
TAA
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| Protein sequence | MKGIILAGGT GSRLYPLTKV TNKHLLPVYD KPMIFYPIQT LVNAGIKEIM IVSGRGHAGH
FLELLGSGAD IGVKFTYEIQ EEAGGIAQAL GLAERFADEE DVAVILGDNI FQDNIKDDVS
NFTDGAKIFL KEVQDAHRFG VAELKGDRVI GIQEKPREPK SNFAVTGLYI YSNSVFEVVK
TLKPSARGEL EITDVNNYFV NNGTMEYRIL DGFWSDAGTF ESLLRAGVLI QNHCKNKNAE
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