Gene Gbem_2464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2464 
Symbol 
ID6782461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2853061 
End bp2853966 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content61% 
IMG OID642768459 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_002139268 
Protein GI197118841 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000102414 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACAAG GTATCAAGAA GGGGATTCTC CTGGCCGGAG GCGCGGGAAG CAGGCTTTAC 
CCTCTGACCA TGGTAGCGAG CAAGCAGCTG CAGCCGGTCT ACGACAAGCC GATGATCTAT
TACCCGCTGG CGACGCTGAT GATGGCGGGA ATCGCCGACG TGCTGATCAT TTCCACTCCG
CAGGACACCC CCCGCTTCCA GGCGCTATTG GGCGACGGCT CCCGCTGGGG CATCCGTCTT
TCCTACGCGG TGCAGCAAGA ACCCAAGGGG ATCGCGCAGG CGTTTCTCGT CGGGGAGGAG
TTCATCGCCG GCGATCCGGT CTGCCTGATT CTGGGCGACA ACATCTTCTA CGGCAAAATG
GAATTGGATC GTCTCATCAC CGGTTTTGAC GGCGGCGCCA GGATTTTCGG CTACTACGTC
CAGGATCCGG AGCGTTACGG CGTGGTCGAG TTCGACCGAG AAGACCGGGC GCTCAGCATC
GAAGAGAAGC CGGCCCATCC CAAGTCGAAC TACGCGGTCC CAGGGCTGTA CCTCTACGAC
GGCAAGGTTG TGCAGATCGC CAAGGAGTTG GAGCCCTCGC CGCGGGGCGA GCTGGAAATC
ACGGATGTGA ACCTGGAGTA CTTAAGGCGC GGCGAACTTT CGGTGCAAAG GCTCGGGCGC
GGCATCGCCT GGCTCGACAC CGGAACCCAC CAAAGCCTTC TCGAGGCGTC CCACTTCATA
GGAACCCTGG AGGCGCGGCA GGGACTGAAG ATCGCTTGCC TGGAGGAGAT AGCGCTCCGG
ATGGGGTACC TTGACTGCGC GGCGATGGCC AAGGTCATCG ATGCCACCCC CAACTCCTCG
TATCGGGACT ATCTGGTGCG GGTTTACAAC GAGACTACGC TTTGCGGGGG AGGGATGGGA
GCATGA
 
Protein sequence
MPQGIKKGIL LAGGAGSRLY PLTMVASKQL QPVYDKPMIY YPLATLMMAG IADVLIISTP 
QDTPRFQALL GDGSRWGIRL SYAVQQEPKG IAQAFLVGEE FIAGDPVCLI LGDNIFYGKM
ELDRLITGFD GGARIFGYYV QDPERYGVVE FDREDRALSI EEKPAHPKSN YAVPGLYLYD
GKVVQIAKEL EPSPRGELEI TDVNLEYLRR GELSVQRLGR GIAWLDTGTH QSLLEASHFI
GTLEARQGLK IACLEEIALR MGYLDCAAMA KVIDATPNSS YRDYLVRVYN ETTLCGGGMG
A