Gene Gmet_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0924 
Symbol 
ID3740080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1018777 
End bp1019685 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content62% 
IMG OID637778203 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_383891 
Protein GI78222144 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form
[TIGR01208] glucose-1-phosphate thymidylylransferase, long form 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCA AGAAGGGTAT CATCCTCGCC GGCGGCGCCG GCAGCCGCCT CTATCCCCTT 
ACCCTCGTTG CCAGCAAGCA GTTGCAGCCG GTCTACGACA AGCCGATGAT CTACTATCCC
CTGGCCACCC TCATGATGGC AGGGATCAGT GACATCCTCA TCATCTCTAC CCCCCATGAC
ACCCCCCGCT TCCAGTCGCT CCTCGGCGAC GGCTCCCGCT GGGGGATCCG GCTCACCTAC
AAGGTGCAGC CCGAGCCCAA GGGAATTGCC CAGGCATTCC TGGTGGGGGA GGAGTTCATT
GCCGGCGATC CGGTCTGTCT CATCCTCGGC GACAACATCT TCTACGGCAA GATGGGGCTC
GACCGGGCCA TCCGCGATTT CGCCGGAGGC GCCCTTGTCT TCGGCTACTA CGTGAACGAC
CCCGAACGGT ACGGGGTGGT GCAGTTCGAC GGTTCCGGCA AGGCCATCGG CATCGAGGAG
AAACCGGCTG CCCCCAAGAG CAACTACGCC GTGCCAGGGC TCTACCTCTA CGACGGGAAG
GTTTCTGAGA TCGCCCGCAA TCTTGCCCCT TCCGCCCGGG GGGAGCTGGA GATCACCGAC
GTGAACCTGG AGTACCTGCG GCGGGGCGAA CTCATGGTGG AAAAGCTCGG CCGGGGAATC
GCCTGGCTCG ACACCGGCAC CCACCAGAGT CTCCTGGAGG CATCCCACTT CATCGGCACC
CTGGAGGCCC GGCAGGGTCT CAAGATCGCC TGTCTCGAAG AGATAGCCCT GAGGATGGGG
TATATCGACT GTCGCAAGAT GGCGGAGGTG ATTGCCGCCA CTCCCAACTC CTCGTACCGG
GAATACCTGG TGCGGGTCCA TAACGAAACA AACCTGTGCG GAGGGCATGA CGATGCAAAA
CTTTCCTGA
 
Protein sequence
MAIKKGIILA GGAGSRLYPL TLVASKQLQP VYDKPMIYYP LATLMMAGIS DILIISTPHD 
TPRFQSLLGD GSRWGIRLTY KVQPEPKGIA QAFLVGEEFI AGDPVCLILG DNIFYGKMGL
DRAIRDFAGG ALVFGYYVND PERYGVVQFD GSGKAIGIEE KPAAPKSNYA VPGLYLYDGK
VSEIARNLAP SARGELEITD VNLEYLRRGE LMVEKLGRGI AWLDTGTHQS LLEASHFIGT
LEARQGLKIA CLEEIALRMG YIDCRKMAEV IAATPNSSYR EYLVRVHNET NLCGGHDDAK
LS