Gene Ppro_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2548 
Symbol 
ID4572446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp2761824 
End bp2762723 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content61% 
IMG OID639756597 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_902210 
Protein GI118580960 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.257224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGTG GAATCACCAA GGGAATCGTG CTGGCAGGTG GAGCGGGAAG CCGTCTCTAC 
CCCTTGACGC TGGTGTCCAG CAAACAACTC CAGCCGGTGT ACGACAAGCC GCTGATCTAC
TACCCTCTGG CGACCCTCAT GGCCGCTGGT GTCCGCGATA TCCTGCTTAT ATCCACTCCC
CACGATATCC CCCGCTTTCA TGCGCTCTTG GGTGATGGCT CGCGCTGGGG GGTCTCCCTC
TCCTACATGG TTCAGCCGGA ACCGAAGGGG ATCGCCCAAG CGTTTTTGCT CGGAGAGGAG
TTCATCGCAG ATCAGCCGGT TGCCCTGATC CTGGGGGACA ACATCTTCTA CGGCAGGATG
CATCTGGACC GCATTATGGC CGAGTTTCAG TGGGGGGCGC GCATCTTCGG CTACCAGGTT
CATGATCCCG AACGCTACGG CGTGGTGGAA TTCGACTGCG CCGGCACGGT GCTCTCCATC
GAGGAAAAAC CGCAGAACCC AAAATCCAGC TACGCCGTGC CGGGGCTGTA TCTGTATGAC
AACCAGGTGG TGTCCATCGC CAAGGCCATG AAACCTTCCG CCCGGGGAGA ACTGGAAATC
ACCGACGTCA ACCTGGAGTA CCTACGCCGT GGCCAGTTGA CCGTGGAGCG CCTGGGGCGG
GGCATCGCCT GGCTGGACAC CGGTACCCAC AAGAGCCTGC TGGAGGCCAG CAATTTCATC
GAAACCATCG AATCGCGCCA GGGGCTGAAG ATCGCCTGCC TGGAGGAGAT CGCCCTCAGG
CTCGGCTTTA TCGGCCTGAC ACAGATGCGG AAGCTGATCA GGGAGACTCC CGTCTCATCC
TATGGCGACT ACCTCCGGCG GGTCTGCGAA GAGGCGGAGC GCTGTGCGAT CGCTTCCTGA
 
Protein sequence
MSRGITKGIV LAGGAGSRLY PLTLVSSKQL QPVYDKPLIY YPLATLMAAG VRDILLISTP 
HDIPRFHALL GDGSRWGVSL SYMVQPEPKG IAQAFLLGEE FIADQPVALI LGDNIFYGRM
HLDRIMAEFQ WGARIFGYQV HDPERYGVVE FDCAGTVLSI EEKPQNPKSS YAVPGLYLYD
NQVVSIAKAM KPSARGELEI TDVNLEYLRR GQLTVERLGR GIAWLDTGTH KSLLEASNFI
ETIESRQGLK IACLEEIALR LGFIGLTQMR KLIRETPVSS YGDYLRRVCE EAERCAIAS