More than 300 homologs were found in PanDaTox collection
for query gene MCAP_0575 on replicon NC_007633
Organism: Mycoplasma capricolum subsp. capricolum ATCC 27343



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007633  MCAP_0575  DNA-binding protein HU 1  100 
 
 
90 aa  175  2e-43  Mycoplasma capricolum subsp. capricolum ATCC 27343  Bacteria  normal  0.0129135  n/a   
 
 
-
 
NC_006055  Mfl201  histone-like DNA-binding protein  68.54 
 
 
90 aa  122  2e-27  Mesoplasma florum L1  Bacteria  normal  0.25153  n/a   
 
 
-
 
NC_007633  MCAP_0313  DNA-binding protein, HU  50 
 
 
92 aa  95.9  1e-19  Mycoplasma capricolum subsp. capricolum ATCC 27343  Bacteria  normal  0.657113  n/a   
 
 
-
 
NC_013739  Cwoe_1870  histone family protein DNA-binding protein  49.44 
 
 
91 aa  92.4  2e-18  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0130937 
 
 
-
 
NC_007643  Rru_A1553  histone-like DNA-binding protein  42.7 
 
 
91 aa  85.5  2e-16  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_1957  histone-like DNA-binding protein  42.53 
 
 
91 aa  84.7  3e-16  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  0.000024611  normal  0.388646 
 
 
-
 
NC_011059  Paes_0293  histone family protein DNA-binding protein  43.68 
 
 
94 aa  84.3  5e-16  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.416752  normal  0.0238993 
 
 
-
 
NC_008639  Cpha266_0238  histone family protein DNA-binding protein  42.7 
 
 
91 aa  82.8  0.000000000000001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_3229  histone family protein DNA-binding protein  44.94 
 
 
91 aa  83.2  0.000000000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4266  histone family protein DNA-binding protein  42.7 
 
 
93 aa  82.4  0.000000000000002  Variovorax paradoxus S110  Bacteria  normal  0.598481  n/a   
 
 
-
 
NC_010803  Clim_0201  histone family protein DNA-binding protein  41.38 
 
 
91 aa  82  0.000000000000002  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000000429798  n/a   
 
 
-
 
NC_008609  Ppro_1181  histone family protein DNA-binding protein  42.7 
 
 
92 aa  82.4  0.000000000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.42545  n/a   
 
 
-
 
NC_008554  Sfum_2107  histone family protein DNA-binding protein  45.98 
 
 
90 aa  82  0.000000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.00000844989  hitchhiker  0.00906741 
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  43.82 
 
 
90 aa  80.9  0.000000000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  42.7 
 
 
90 aa  80.5  0.000000000000007  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_011365  Gdia_3327  histone family protein DNA-binding protein  43.82 
 
 
94 aa  79.7  0.00000000000001  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.372094  normal  0.0697763 
 
 
-
 
NC_008752  Aave_1666  histone family protein DNA-binding protein  41.57 
 
 
90 aa  79.7  0.00000000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1866  histone family protein DNA-binding protein  39.33 
 
 
90 aa  79.3  0.00000000000002  Ralstonia pickettii 12J  Bacteria  normal  0.0187787  hitchhiker  0.00274705 
 
 
-
 
NC_009727  CBUD_0508  DNA-binding protein HU  42.7 
 
 
94 aa  78.6  0.00000000000002  Coxiella burnetii Dugway 5J108-111  Bacteria  hitchhiker  0.000000377509  n/a   
 
 
-
 
NC_012856  Rpic12D_1533  histone family protein DNA-binding protein  39.33 
 
 
90 aa  79  0.00000000000002  Ralstonia pickettii 12D  Bacteria  normal  0.753498  normal  0.353479 
 
 
-
 
NC_011883  Ddes_1090  histone family protein DNA-binding protein  37.08 
 
 
90 aa  79  0.00000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2879  histone family protein DNA-binding protein  42.7 
 
 
90 aa  79  0.00000000000002  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010117  COXBURSA331_A1641  DNA-binding protein HU  42.7 
 
 
94 aa  78.6  0.00000000000002  Coxiella burnetii RSA 331  Bacteria  unclonable  7.02248e-19  n/a   
 
 
-
 
NC_009475  BBta_p0009  histone-like DNA-binding protein  42.05 
 
 
130 aa  79  0.00000000000002  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  0.101373 
 
 
-
 
NC_013223  Dret_1900  histone family protein DNA-binding protein  38.2 
 
 
90 aa  79  0.00000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0802524 
 
 
-
 
NC_011060  Ppha_2673  histone family protein DNA-binding protein  40 
 
 
91 aa  79  0.00000000000002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.156087  n/a   
 
 
-
 
NC_010577  XfasM23_0470  histone family protein DNA-binding protein  41.57 
 
 
94 aa  78.6  0.00000000000003  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1430  histone family protein DNA-binding protein  38.2 
 
 
90 aa  78.6  0.00000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000153062  normal  0.144736 
 
 
-
 
NC_007514  Cag_0362  histone-like DNA-binding protein  38.2 
 
 
91 aa  77.8  0.00000000000004  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0085  nucleoid protein Hbs  43.82 
 
 
91 aa  77.8  0.00000000000004  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0539634  normal 
 
 
-
 
NC_007484  Noc_2966  histone-like DNA-binding protein  42.53 
 
 
94 aa  77.8  0.00000000000005  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0128316  n/a   
 
 
-
 
NC_007519  Dde_2058  histone-like DNA-binding protein  35.96 
 
 
90 aa  77.8  0.00000000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.954956  n/a   
 
 
-
 
NC_011126  HY04AAS1_1051  histone family protein DNA-binding protein  40.23 
 
 
89 aa  77.8  0.00000000000005  Hydrogenobaculum sp. Y04AAS1  Bacteria  unclonable  0.00000000000000497636  n/a   
 
 
-
 
NC_012918  GM21_3008  histone family protein DNA-binding protein  42.53 
 
 
91 aa  77.8  0.00000000000005  Geobacter sp. M21  Bacteria  n/a    normal  0.341575 
 
 
-
 
NC_013173  Dbac_2463  histone family protein DNA-binding protein  35.96 
 
 
90 aa  77.4  0.00000000000006  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0228112  n/a   
 
 
-
 
NC_011146  Gbem_1275  histone family protein DNA-binding protein  42.53 
 
 
91 aa  77.4  0.00000000000006  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000000292942  n/a   
 
 
-
 
NC_008528  OEOE_1010  nucleoid protein Hbs  39.08 
 
 
91 aa  77.4  0.00000000000006  Oenococcus oeni PSU-1  Bacteria  normal  0.301873  n/a   
 
 
-
 
NC_012880  Dd703_2873  transcriptional regulator HU subunit beta  39.33 
 
 
90 aa  77  0.00000000000007  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1051  transcriptional regulator HU subunit beta  39.33 
 
 
90 aa  77  0.00000000000007  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.593082  n/a   
 
 
-
 
NC_007498  Pcar_1686  DNA-binding protein HU-beta, NS1(HU-1)  40.45 
 
 
90 aa  77.4  0.00000000000007  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  6.460310000000001e-19  n/a   
 
 
-
 
NC_013421  Pecwa_3261  transcriptional regulator HU subunit beta  39.33 
 
 
90 aa  77  0.00000000000007  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1926  histone family protein DNA-binding protein  42.7 
 
 
92 aa  77.4  0.00000000000007  Geobacter lovleyi SZ  Bacteria  unclonable  0.0000000201993  n/a   
 
 
-
 
NC_010465  YPK_3231  transcriptional regulator HU subunit beta  39.33 
 
 
90 aa  77  0.00000000000008  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3089  transcriptional regulator HU subunit beta  39.33 
 
 
90 aa  77  0.00000000000008  Yersinia pseudotuberculosis IP 31758  Bacteria  unclonable  1.42002e-19  n/a   
 
 
-
 
NC_010159  YpAngola_A3051  transcriptional regulator HU subunit beta  39.33 
 
 
90 aa  77  0.00000000000008  Yersinia pestis Angola  Bacteria  hitchhiker  0.00488463  normal 
 
 
-
 
NC_011769  DvMF_0500  histone family protein DNA-binding protein  37.08 
 
 
90 aa  77  0.00000000000008  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.000759527 
 
 
-
 
NC_002939  GSU3132  DNA-binding protein HU  38.2 
 
 
94 aa  76.3  0.0000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.246817  n/a   
 
 
-
 
NC_002977  MCA0532  DNA-binding protein HU-beta  40.45 
 
 
90 aa  76.3  0.0000000000001  Methylococcus capsulatus str. Bath  Bacteria  decreased coverage  0.00043104  n/a   
 
 
-
 
NC_003295  RSc1714  DNA-binding protein HU-beta  37.08 
 
 
90 aa  76.6  0.0000000000001  Ralstonia solanacearum GMI1000  Bacteria  normal  0.606946  normal  0.0324854 
 
 
-
 
NC_009513  Lreu_0765  nucleoid protein Hbs  40.23 
 
 
91 aa  76.3  0.0000000000001  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000296782  n/a   
 
 
-
 
NC_007498  Pcar_1880  nucleoid DNA-binding protein  45.45 
 
 
94 aa  76.3  0.0000000000001  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000000082072  n/a   
 
 
-
 
NC_007517  Gmet_0355  histone-like DNA-binding protein  38.2 
 
 
94 aa  76.3  0.0000000000001  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00204011  normal  0.390975 
 
 
-
 
NC_011772  BCG9842_B2983  DNA-binding protein HU  43.82 
 
 
90 aa  76.3  0.0000000000001  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3065  transcriptional regulator HU subunit beta  39.33 
 
 
90 aa  76.3  0.0000000000001  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_3249  histone-like DNA-binding protein  41.57 
 
 
90 aa  76.6  0.0000000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0070  nucleoid protein Hbs  46.07 
 
 
92 aa  76.3  0.0000000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0240129  normal 
 
 
-
 
NC_011725  BCB4264_A2342  DNA-binding protein HU  43.82 
 
 
90 aa  76.3  0.0000000000001  Bacillus cereus B4264  Bacteria  normal  0.868034  n/a   
 
 
-
 
NC_011060  Ppha_1317  histone family protein DNA-binding protein  43.02 
 
 
91 aa  76.6  0.0000000000001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0600  histone family protein DNA-binding protein  42.7 
 
 
90 aa  76.3  0.0000000000001  Halorhodospira halophila SL1  Bacteria  normal  0.0791658  n/a   
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  42.7 
 
 
90 aa  75.9  0.0000000000002  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_003909  BCE_2407  DNA-binding protein HU  43.82 
 
 
90 aa  75.9  0.0000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  0.020348  n/a   
 
 
-
 
NC_008782  Ajs_2621  histone family protein DNA-binding protein  41.57 
 
 
90 aa  75.5  0.0000000000002  Acidovorax sp. JS42  Bacteria  normal  0.348082  normal  0.0833374 
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  42.7 
 
 
90 aa  75.9  0.0000000000002  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  42.7 
 
 
90 aa  75.9  0.0000000000002  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  42.7 
 
 
90 aa  75.9  0.0000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_005945  BAS2213  DNA-binding protein HU  43.82 
 
 
90 aa  75.9  0.0000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.519209  n/a   
 
 
-
 
NC_009674  Bcer98_1233  histone family protein DNA-binding protein  42.7 
 
 
90 aa  75.9  0.0000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0133564  n/a   
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  42.7 
 
 
90 aa  75.9  0.0000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_005957  BT9727_2152  DNA-binding protein HU  43.82 
 
 
90 aa  75.9  0.0000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0274093  n/a   
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  42.7 
 
 
90 aa  75.9  0.0000000000002  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_006274  BCZK2136  DNA-binding protein HU  43.82 
 
 
90 aa  75.9  0.0000000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp1826  hypothetical protein  41.57 
 
 
92 aa  75.5  0.0000000000002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1822  hypothetical protein  41.57 
 
 
92 aa  75.5  0.0000000000002  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011658  BCAH187_A2477  DNA-binding protein HU  43.82 
 
 
90 aa  75.9  0.0000000000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_43920  histone-like DNA-binding protein  42.7 
 
 
90 aa  75.5  0.0000000000002  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  42.7 
 
 
90 aa  75.9  0.0000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_007530  GBAA_2377  DNA-binding protein HU  43.82 
 
 
90 aa  75.9  0.0000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0186  histone family protein DNA-binding protein  45.98 
 
 
90 aa  75.5  0.0000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1604  DNA-binding protein HU  42.7 
 
 
90 aa  75.9  0.0000000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000159132 
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  42.7 
 
 
90 aa  75.9  0.0000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  42.7 
 
 
90 aa  75.9  0.0000000000002  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_011773  BCAH820_2395  DNA-binding protein HU  43.82 
 
 
90 aa  75.9  0.0000000000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011992  Dtpsy_1187  histone family protein DNA-binding protein  41.57 
 
 
90 aa  75.5  0.0000000000002  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2285  histone family protein DNA-binding protein  41.57 
 
 
90 aa  75.9  0.0000000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0556838  normal 
 
 
-
 
NC_008346  Swol_0083  DNA-binding protein HU (DNA-binding protein II)  42.22 
 
 
90 aa  75.9  0.0000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1584  histone family protein DNA-binding protein  42.7 
 
 
91 aa  75.9  0.0000000000002  Halorhodospira halophila SL1  Bacteria  normal  0.532726  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2184  histone family protein DNA-binding protein  42.7 
 
 
90 aa  75.5  0.0000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.170143  n/a   
 
 
-
 
NC_011080  SNSL254_A0500  transcriptional regulator HU subunit beta  38.2 
 
 
90 aa  75.1  0.0000000000003  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.332585  normal  0.0268714 
 
 
-
 
NC_011094  SeSA_A0510  transcriptional regulator HU subunit beta  38.2 
 
 
90 aa  75.1  0.0000000000003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.0507646  normal 
 
 
-
 
NC_007513  Syncc9902_0579  histone-like DNA-binding protein  42.53 
 
 
91 aa  75.1  0.0000000000003  Synechococcus sp. CC9902  Bacteria  normal  0.410031  n/a   
 
 
-
 
NC_007516  Syncc9605_2092  nucleoid protein Hbs  42.53 
 
 
91 aa  75.1  0.0000000000003  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_2752  histone-like DNA-binding protein  40 
 
 
91 aa  75.1  0.0000000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A0493  transcriptional regulator HU subunit beta  38.2 
 
 
90 aa  75.1  0.0000000000003  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.107938  normal 
 
 
-
 
NC_007912  Sde_1611  nucleoid protein HU beta subunit  40.45 
 
 
90 aa  75.1  0.0000000000003  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.000132089  normal 
 
 
-
 
NC_011083  SeHA_C0554  transcriptional regulator HU subunit beta  38.2 
 
 
90 aa  75.1  0.0000000000003  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  hitchhiker  0.00736621  normal 
 
 
-
 
NC_008048  Sala_2632  histone-like DNA-binding protein  42.7 
 
 
91 aa  75.1  0.0000000000003  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B0491  transcriptional regulator HU subunit beta  38.2 
 
 
90 aa  75.1  0.0000000000003  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0126716  n/a   
 
 
-
 
NC_013206  Aaci_3021  histone family protein DNA-binding protein  39.33 
 
 
91 aa  74.7  0.0000000000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1417  histone-like DNA-binding protein  41.57 
 
 
91 aa  74.7  0.0000000000004  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00000053245  normal  0.466182 
 
 
-
 
NC_009483  Gura_1918  histone family protein DNA-binding protein  41.86 
 
 
91 aa  74.7  0.0000000000004  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000000897645  n/a   
 
 
-
 
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