More than 300 homologs were found in PanDaTox collection
for query gene Dde_1432 on replicon NC_007519
Organism: Desulfovibrio desulfuricans subsp. desulfuricans str. G20



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007519  Dde_1432  50S ribosomal protein L11P methyltransferase  100 
 
 
283 aa  572  1.0000000000000001e-162  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.362511  n/a   
 
 
-
 
NC_011769  DvMF_3155  ribosomal L11 methyltransferase  65.51 
 
 
286 aa  382  1e-105  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.11124 
 
 
-
 
NC_008751  Dvul_0920  ribosomal L11 methyltransferase  62.9 
 
 
283 aa  361  7.0000000000000005e-99  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.276703 
 
 
-
 
NC_011883  Ddes_1004  ribosomal L11 methyltransferase  55.12 
 
 
282 aa  311  1e-83  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2871  ribosomal L11 methyltransferase  44.84 
 
 
284 aa  226  2e-58  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2156  ribosomal L11 methyltransferase  40.07 
 
 
296 aa  205  6e-52  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.176074 
 
 
-
 
NC_008781  Pnap_3390  ribosomal protein L11 methyltransferase  43 
 
 
297 aa  133  3e-30  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.375634 
 
 
-
 
NC_007520  Tcr_0442  ribosomal protein L11 methyltransferase  35.12 
 
 
294 aa  132  6.999999999999999e-30  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_15391  ribosomal protein L11 methyltransferase  33.64 
 
 
303 aa  131  1.0000000000000001e-29  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_0528  ribosomal protein L11 methyltransferase  37.21 
 
 
295 aa  130  3e-29  Synechococcus sp. CC9902  Bacteria  normal  0.0113889  n/a   
 
 
-
 
NC_009379  Pnuc_0208  ribosomal protein L11 methyltransferase  39.34 
 
 
506 aa  129  7.000000000000001e-29  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  hitchhiker  0.00971698  n/a   
 
 
-
 
NC_014212  Mesil_1998  ribosomal L11 methyltransferase  38.5 
 
 
253 aa  128  8.000000000000001e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  0.831895  normal 
 
 
-
 
NC_010338  Caul_1594  ribosomal L11 methyltransferase  39.29 
 
 
288 aa  128  1.0000000000000001e-28  Caulobacter sp. K31  Bacteria  normal  0.77497  normal 
 
 
-
 
NC_007604  Synpcc7942_1500  ribosomal protein L11 methyltransferase  35.11 
 
 
299 aa  128  1.0000000000000001e-28  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_1994  ribosomal protein L11 methyltransferase  33.94 
 
 
316 aa  127  3e-28  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.467353  n/a   
 
 
-
 
NC_009972  Haur_3109  ribosomal protein L11 methyltransferase  33.76 
 
 
321 aa  126  4.0000000000000003e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00713701  n/a   
 
 
-
 
NC_009976  P9211_14081  ribosomal protein L11 methyltransferase  30.27 
 
 
305 aa  125  6e-28  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0500355  normal  0.0701563 
 
 
-
 
NC_011830  Dhaf_4297  ribosomal protein L11 methyltransferase  35.27 
 
 
312 aa  125  6e-28  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000247915  n/a   
 
 
-
 
NC_012791  Vapar_0951  ribosomal protein L11 methyltransferase  43.92 
 
 
294 aa  125  7e-28  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_0228  ribosomal protein L11 methyltransferase  37.5 
 
 
328 aa  125  7e-28  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  hitchhiker  0.00278387  normal 
 
 
-
 
NC_013946  Mrub_1586  ribosomal L11 methyltransferase  37.35 
 
 
275 aa  125  7e-28  Meiothermus ruber DSM 1279  Bacteria  normal  0.472869  normal  0.567959 
 
 
-
 
NC_007298  Daro_3937  ribosomal protein L11 methyltransferase  40 
 
 
296 aa  124  1e-27  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0015501  normal 
 
 
-
 
NC_008609  Ppro_2959  ribosomal protein L11 methyltransferase  36.49 
 
 
309 aa  125  1e-27  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.00000000148567  n/a   
 
 
-
 
NC_007963  Csal_2286  50S ribosomal protein L11P methyltransferase  39.41 
 
 
299 aa  124  2e-27  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0455  ribosomal protein L11 methyltransferase  38.68 
 
 
293 aa  124  2e-27  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00000781607  n/a   
 
 
-
 
NC_008709  Ping_3214  methyltransferase of 50S ribosomal subunit protein L11  36.67 
 
 
311 aa  124  2e-27  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.450631 
 
 
-
 
NC_011146  Gbem_0241  ribosomal protein L11 methyltransferase  39.23 
 
 
306 aa  123  3e-27  Geobacter bemidjiensis Bem  Bacteria  unclonable  0.0000000356795  n/a   
 
 
-
 
NC_002976  SERP1146  ribosomal protein L11 methyltransferase  27.13 
 
 
312 aa  124  3e-27  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2947  ribosomal protein L11 methyltransferase  42.11 
 
 
297 aa  123  3e-27  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2455  ribosomal protein L11 methyltransferase  37.15 
 
 
302 aa  123  3e-27  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000000737706  n/a   
 
 
-
 
NC_007948  Bpro_1101  ribosomal protein L11 methyltransferase  41.75 
 
 
298 aa  123  4e-27  Polaromonas sp. JS666  Bacteria  normal  0.0205003  normal 
 
 
-
 
NC_009831  Ssed_4117  ribosomal protein L11 methyltransferase  40.72 
 
 
293 aa  123  4e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0350894  hitchhiker  0.000425949 
 
 
-
 
NC_008309  HS_0566  ribosomal protein L11 methyltransferase  40.84 
 
 
296 aa  123  4e-27  Haemophilus somnus 129PT  Bacteria  normal  0.0178303  n/a   
 
 
-
 
NC_008554  Sfum_3897  ribosomal protein L11 methyltransferase  38.24 
 
 
290 aa  123  4e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.147825 
 
 
-
 
NC_009457  VC0395_A2687  ribosomal protein L11 methyltransferase  40.31 
 
 
295 aa  122  6e-27  Vibrio cholerae O395  Bacteria  hitchhiker  0.000011349  n/a   
 
 
-
 
NC_009632  SaurJH1_1670  ribosomal protein L11 methyltransferase  29.19 
 
 
312 aa  122  6e-27  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1636  ribosomal protein L11 methyltransferase  29.19 
 
 
312 aa  122  6e-27  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.0215506  n/a   
 
 
-
 
NC_008782  Ajs_3637  ribosomal protein L11 methyltransferase  42.33 
 
 
297 aa  122  7e-27  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1724  ribosomal protein L11 methyltransferase  29.93 
 
 
327 aa  122  7e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_0961  50S ribosomal protein L11P methyltransferase  41.18 
 
 
290 aa  122  7e-27  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_3066  ribosomal protein L11 methyltransferase  42.86 
 
 
304 aa  122  7e-27  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2494  ribosomal protein L11 methyltransferase  33.47 
 
 
308 aa  122  7e-27  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00440175  n/a   
 
 
-
 
NC_009438  Sputcn32_3442  ribosomal protein L11 methyltransferase  38.54 
 
 
293 aa  122  9e-27  Shewanella putrefaciens CN-32  Bacteria  normal  0.116345  n/a   
 
 
-
 
NC_010506  Swoo_0506  ribosomal protein L11 methyltransferase  39.06 
 
 
293 aa  121  9.999999999999999e-27  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0662184  hitchhiker  0.00329443 
 
 
-
 
NC_007954  Sden_0446  ribosomal protein L11 methyltransferase  39.06 
 
 
293 aa  122  9.999999999999999e-27  Shewanella denitrificans OS217  Bacteria  normal  0.119875  n/a   
 
 
-
 
NC_009523  RoseRS_3037  ribosomal protein L11 methyltransferase  32.31 
 
 
341 aa  121  9.999999999999999e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_00173  ribosomal protein L11 methyltransferase  39.27 
 
 
295 aa  121  9.999999999999999e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008825  Mpe_A3208  ribosomal protein L11 methyltransferase  40.84 
 
 
300 aa  122  9.999999999999999e-27  Methylibium petroleiphilum PM1  Bacteria  normal  0.0770215  decreased coverage  0.00369905 
 
 
-
 
NC_010002  Daci_1496  ribosomal protein L11 methyltransferase  42.41 
 
 
296 aa  120  1.9999999999999998e-26  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0225  ribosomal protein L11 methyltransferase  38.28 
 
 
306 aa  120  1.9999999999999998e-26  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011989  Avi_2857  ribosomal protein L11 methyltransferase  34.54 
 
 
290 aa  121  1.9999999999999998e-26  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0859  ribosomal protein L11 methyltransferase  43.16 
 
 
293 aa  120  3e-26  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236714  normal  0.0659327 
 
 
-
 
NC_013525  Tter_0972  ribosomal protein L11 methyltransferase  36.53 
 
 
315 aa  120  3e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_002195  ribosomal protein L11 methyltransferase  39.27 
 
 
295 aa  120  3e-26  Vibrio sp. Ex25  Bacteria  decreased coverage  0.00271176  n/a   
 
 
-
 
NC_012880  Dd703_3687  ribosomal protein L11 methyltransferase  39.27 
 
 
295 aa  120  3e-26  Dickeya dadantii Ech703  Bacteria  normal  0.768619  n/a   
 
 
-
 
NC_010501  PputW619_4608  ribosomal protein L11 methyltransferase  38.84 
 
 
292 aa  120  3e-26  Pseudomonas putida W619  Bacteria  normal  0.393114  normal  0.0610739 
 
 
-
 
NC_013411  GYMC61_1015  ribosomal protein L11 methyltransferase  31.63 
 
 
312 aa  120  3e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008228  Patl_0092  ribosomal protein L11 methyltransferase  38.92 
 
 
292 aa  120  3e-26  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3963  ribosomal protein L11 methyltransferase  37.5 
 
 
293 aa  120  3.9999999999999996e-26  Shewanella baltica OS185  Bacteria  hitchhiker  0.00574631  n/a   
 
 
-
 
NC_013421  Pecwa_0243  ribosomal protein L11 methyltransferase  38.74 
 
 
295 aa  119  3.9999999999999996e-26  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4871  ribosomal protein L11 methyltransferase  38.84 
 
 
292 aa  120  3.9999999999999996e-26  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3033  ribosomal protein L11 methyltransferase  40.31 
 
 
298 aa  119  3.9999999999999996e-26  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3224  ribosomal protein L11 methyltransferase  37.88 
 
 
295 aa  119  3.9999999999999996e-26  Shewanella amazonensis SB2B  Bacteria  normal  0.105508  normal 
 
 
-
 
NC_011004  Rpal_4031  ribosomal L11 methyltransferase  38 
 
 
296 aa  119  4.9999999999999996e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0295987  n/a   
 
 
-
 
NC_007517  Gmet_3386  50S ribosomal protein L11P methyltransferase  36.84 
 
 
299 aa  119  4.9999999999999996e-26  Geobacter metallireducens GS-15  Bacteria  normal  0.0387461  normal 
 
 
-
 
NC_007577  PMT9312_1451  ribosomal protein L11 methyltransferase  32.09 
 
 
303 aa  119  4.9999999999999996e-26  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.279923  n/a   
 
 
-
 
NC_012856  Rpic12D_2623  ribosomal protein L11 methyltransferase  38.94 
 
 
298 aa  119  4.9999999999999996e-26  Ralstonia pickettii 12D  Bacteria  normal  normal  0.906319 
 
 
-
 
NC_002947  PP_4818  ribosomal protein L11 methyltransferase  37.95 
 
 
292 aa  119  6e-26  Pseudomonas putida KT2440  Bacteria  normal  0.983059  normal 
 
 
-
 
NC_009052  Sbal_3938  ribosomal protein L11 methyltransferase  37.5 
 
 
293 aa  119  6e-26  Shewanella baltica OS155  Bacteria  decreased coverage  0.000797733  n/a   
 
 
-
 
NC_008783  BARBAKC583_0935  ribosomal protein L11 methyltransferase  35.84 
 
 
291 aa  119  6e-26  Bartonella bacilliformis KC583  Bacteria  normal  0.199402  n/a   
 
 
-
 
NC_004347  SO_0395  ribosomal protein L11 methyltransferase  37.5 
 
 
293 aa  119  7e-26  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012917  PC1_0239  ribosomal protein L11 methyltransferase  39.38 
 
 
295 aa  119  7e-26  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2781  ribosomal protein L11 methyltransferase  40 
 
 
300 aa  119  7e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008820  P9303_05251  ribosomal protein L11 methyltransferase  34.02 
 
 
301 aa  119  7e-26  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_011369  Rleg2_2573  ribosomal protein L11 methyltransferase  33.33 
 
 
292 aa  119  7.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.316492  normal 
 
 
-
 
NC_009512  Pput_4693  ribosomal protein L11 methyltransferase  37.95 
 
 
292 aa  119  7.999999999999999e-26  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0529  ribosomal protein L11 methyltransferase  38.94 
 
 
300 aa  118  9e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  0.579214  normal 
 
 
-
 
NC_007760  Adeh_0246  50S ribosomal protein L11P methyltransferase  41.4 
 
 
287 aa  118  9e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0486812  n/a   
 
 
-
 
NC_011663  Sbal223_3886  ribosomal protein L11 methyltransferase  37.5 
 
 
293 aa  118  9e-26  Shewanella baltica OS223  Bacteria  normal  0.393855  hitchhiker  0.00000257617 
 
 
-
 
NC_009483  Gura_4290  ribosomal protein L11 methyltransferase  35.62 
 
 
315 aa  118  9e-26  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000000135815  n/a   
 
 
-
 
NC_008390  Bamb_0505  ribosomal protein L11 methyltransferase  38.94 
 
 
300 aa  118  9e-26  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2983  ribosomal protein L11 methyltransferase  41.15 
 
 
296 aa  118  9.999999999999999e-26  Marinomonas sp. MWYL1  Bacteria  normal  0.599101  normal  0.251528 
 
 
-
 
NC_010508  Bcenmc03_0572  ribosomal protein L11 methyltransferase  40 
 
 
300 aa  118  9.999999999999999e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.000573675 
 
 
-
 
NC_009428  Rsph17025_1227  ribosomal L11 methyltransferase  39.46 
 
 
291 aa  118  9.999999999999999e-26  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.764225 
 
 
-
 
NC_013422  Hneap_1372  ribosomal protein L11 methyltransferase  36.97 
 
 
303 aa  118  9.999999999999999e-26  Halothiobacillus neapolitanus c2  Bacteria  normal  0.71577  n/a   
 
 
-
 
NC_008060  Bcen_0120  ribosomal protein L11 methyltransferase  40 
 
 
300 aa  118  9.999999999999999e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0401  ribosomal protein L11 methyltransferase  37.5 
 
 
293 aa  118  9.999999999999999e-26  Shewanella sp. MR-4  Bacteria  normal  0.0130632  normal 
 
 
-
 
NC_008322  Shewmr7_3624  ribosomal protein L11 methyltransferase  37.5 
 
 
293 aa  118  9.999999999999999e-26  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000162524  normal 
 
 
-
 
NC_008542  Bcen2424_0603  ribosomal protein L11 methyltransferase  40 
 
 
300 aa  118  9.999999999999999e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0400  ribosomal protein L11 methyltransferase  37.5 
 
 
293 aa  118  9.999999999999999e-26  Shewanella sp. ANA-3  Bacteria  normal  0.0151894  normal  0.0533338 
 
 
-
 
NC_003295  RSc2788  ribosomal protein L11 methyltransferase  38.94 
 
 
298 aa  117  1.9999999999999998e-25  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_0540  ribosomal protein L11 methyltransferase  38.07 
 
 
293 aa  117  1.9999999999999998e-25  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0267  ribosomal protein L11 methyltransferase  41.4 
 
 
287 aa  117  1.9999999999999998e-25  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0167166  n/a   
 
 
-
 
NC_007347  Reut_A2867  ribosomal protein L11 methyltransferase  41.27 
 
 
297 aa  117  1.9999999999999998e-25  Ralstonia eutropha JMP134  Bacteria  normal  0.712304  n/a   
 
 
-
 
NC_007404  Tbd_0180  ribosomal protein L11 methyltransferase  40.31 
 
 
296 aa  117  1.9999999999999998e-25  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.0841101 
 
 
-
 
NC_007510  Bcep18194_A3686  ribosomal protein L11 methyltransferase  38.46 
 
 
300 aa  117  1.9999999999999998e-25  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_0256  ribosomal protein L11 methyltransferase  41.4 
 
 
287 aa  117  1.9999999999999998e-25  Anaeromyxobacter sp. K  Bacteria  normal  0.204257  n/a   
 
 
-
 
NC_012793  GWCH70_2435  ribosomal protein L11 methyltransferase  30.7 
 
 
315 aa  116  3e-25  Geobacillus sp. WCH70  Bacteria  normal  0.0183971  n/a   
 
 
-
 
NC_011312  VSAL_I2837  ribosomal protein L11 methyltransferase  36.46 
 
 
294 aa  117  3e-25  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.104112  n/a   
 
 
-
 
NC_012850  Rleg_2834  ribosomal protein L11 methyltransferase  36.82 
 
 
292 aa  117  3e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.180106  normal  0.0556009 
 
 
-
 
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