Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3938 |
Symbol | prmA |
ID | 4841436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 4631919 |
End bp | 4632800 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640121204 |
Product | ribosomal protein L11 methyltransferase |
Protein accession | YP_001052277 |
Protein GI | 126176128 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2264] Ribosomal protein L11 methylase |
TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000797733 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTGGA TCCAACTCCG TATAAACACC AATAGCGATG ACGCTGAAAC CATCAGCGAC TTGCTCATGG AAGAAGGCTC AGTCTCTATC ACCTTCGAAG ACGGTAAAGA CACCCCTATT TTTGAACCTA AACTGGGCGA AACCCCACTG TGGCGCGATA CCGTTGTCGT TGCCCTATTC GATGCAGAAA CCGATCTGAC ACCGACCATC GCCATGTTGA AAACCTTGCC TTTCCTCGGC GAGAACTTCA GCCATAAGGT CGAACAAATT GAAGATAAAG ACTGGGTGCG CGAATGGATG GATAACTTCC ACCCAATCCA ATTCGGCACA CGTCTGTGGA TCTGCCCAAG CTGGCGCGAG ATCCCCGATC CAACTGCAGT CAATGTGATC CTCGATCCCG GTCTTGCCTT CGGCACAGGC ACTCACCCTA CGACAGCACT GTGTTTAGAG TGGCTAGACA GCTTAGATTT AAGCAATGAA GAAGTGATCG ACTTTGGCTG TGGCTCTGGC ATTTTAGCCG TAGCCGCACT GAAACTGGGC GCGAAAAACG TCACAGGTAT CGATATCGAC TATCAAGCCA TCGACGCTTC ACGTGCTAAT GCCGAGCGCA ATGATGTCGC CGACAAGCTA GCCTTGTACT TACCAGAAGA CCAACCCGCC GATCTCAAAG CCGACGTACT GGTCGCCAAT ATTCTTGCTG GCCCACTGAG AGAATTAGCG CCTTTGATCG CAGAACGCGT AAAAACCGGT GGCAAACTTG CCCTTTCCGG TCTCCTCAAA GAACAAGCCC AAGAAATCTC TGACTTTTAT AGCCAATGGT TCGATATGGA CGCAGCGGTT CACAAAGAAG ATTGGAGCCG CTTGACAGGC AAGCGTAAAT AG
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Protein sequence | MPWIQLRINT NSDDAETISD LLMEEGSVSI TFEDGKDTPI FEPKLGETPL WRDTVVVALF DAETDLTPTI AMLKTLPFLG ENFSHKVEQI EDKDWVREWM DNFHPIQFGT RLWICPSWRE IPDPTAVNVI LDPGLAFGTG THPTTALCLE WLDSLDLSNE EVIDFGCGSG ILAVAALKLG AKNVTGIDID YQAIDASRAN AERNDVADKL ALYLPEDQPA DLKADVLVAN ILAGPLRELA PLIAERVKTG GKLALSGLLK EQAQEISDFY SQWFDMDAAV HKEDWSRLTG KRK
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