| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0228 |
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| Symbol | |
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| ID | 6184314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 208138 |
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| End bp | 209124 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641670940 |
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| Product | ribosomal protein L11 methyltransferase |
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| Protein accession | YP_001797139 |
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| Protein GI | 171463026 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2264] Ribosomal protein L11 methylase |
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| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00278387 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTACC GTGAACTGAT ATTCACGGTA GCAGCTGAAA CCGCAGAACC TTTGGGTGAT
GCGCTTTTGG ATTTGGGCGC CCTATCTGTC ACTGTTGAAG ATGATGCCGC TGGTGGATAC
GATGAAAACC CTCTCTACGA AGAACCGGGC CTATCTCCAG AAGTGCAAGC TTGGGATAGA
TCGGCGGTAA CCGCCCTCTT CAATCCTGAG ATTGATACTT CGGGAAGCGC AGAATTTATT
CCTGAATTAC TTGCTTCCTT GAAAGAGGTT GGCTTTAACT TAGCACCTCC TCAAGAAAAA
ACAATTGAAG AGCAAGACTG GGTCCGACTT ACTCAAAGTC AATTTTCACC CATTCAGATT
GGTGAACGCA TTTGGGTGGT GCCATCCTGG CACGATGCAC CAAACGATCC GAACGCAATT
TGTCTCGCAG TGGATCCAGG CCTTGCATTT GGGACAGGGA GTCATCCGAC AACGCATTTA
TGCCTTCTCT GGCTTGAACA ACAAAGTCAT TTAAAAAACC AAAGTCTCTT GGATTACGGA
TGCGGCTCAG GAATTTTGGC AATTGCCGCA GCAAAGTTGG GCTGCAATCC GGTTATTGGT
ACCGATATCG ATCCTCAAGC TATGGTGGCA GCACGCAGCA ATGCAGACAT CAATCACACT
GCCGTTACTT TCGTTTTGCC AAATGAAGGC GCAACAGAAT TAGCTGCAGA AACAAAATAC
GACATCGTGA TGGCCAATAT TTTAGCTAAT CCCCTGCAAG TTCTTGCTCC TGCACTGGTG
AATAAGATGA AATTGGGTGG ACGTATTGTG CTGTCTGGAG TTCTTGCCCG CCAAGCAGAA
GAAGTAATTG CCACTTATAG TCAATGGTTA ACACCCTCGG TCTGGAAGGA GAGTGAAGGC
TGGGTTTGCC TGCACGGCAC ACTAAATCAA GACAAGCAAA ATACTGCAAG CACTGTTTTT
GCTGCACCTG CTCAAAAAAA GTTTTAA
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| Protein sequence | MSYRELIFTV AAETAEPLGD ALLDLGALSV TVEDDAAGGY DENPLYEEPG LSPEVQAWDR
SAVTALFNPE IDTSGSAEFI PELLASLKEV GFNLAPPQEK TIEEQDWVRL TQSQFSPIQI
GERIWVVPSW HDAPNDPNAI CLAVDPGLAF GTGSHPTTHL CLLWLEQQSH LKNQSLLDYG
CGSGILAIAA AKLGCNPVIG TDIDPQAMVA ARSNADINHT AVTFVLPNEG ATELAAETKY
DIVMANILAN PLQVLAPALV NKMKLGGRIV LSGVLARQAE EVIATYSQWL TPSVWKESEG
WVCLHGTLNQ DKQNTASTVF AAPAQKKF
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