| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0455 |
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| Symbol | prmA |
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| ID | 4278153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 521043 |
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| End bp | 521924 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133213 |
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| Product | ribosomal protein L11 methyltransferase |
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| Protein accession | YP_749155 |
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| Protein GI | 114561642 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2264] Ribosomal protein L11 methylase |
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| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000781607 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTGGA TCCAATTACG CATTCACACA CATCGCGATA ACGCCGACTT GCTTGGCGAC
TTATTAATGG ATCAAGGTTC ACTTTCCATC ACCTATGAAG ATGGCCAAGA CGAGCCTATT
TTCGAACCAA AATTAGGTGA AACACCACTG TGGCAAGATA CCGTAATGAT TGCATTATTT
GATGCGGGTA CTGACTTAGC ACCAACAATC GAGTTTTTAG AATCAATGCC ATTTTTAGGC
AAAGGTTTTA ATCATAAAAT TGAACAAGTC GAAGATAAAG ACTGGATCCG CGAATGGATG
GACAGCTTTC ACCCAATCCA ATTTGGTTCA CGCTTATGGA TTTGCCCTAG CTGGCGTGAA
ATTCCTGACC CGACCGCTGT TAACGTCATT CTCGATCCAG GTTTAGCGTT TGGTACAGGT
ACTCACCCTA CCACCGCCTT ATGTTTAGAA TGGTTAGACA GCCTTGATTT ATCAAACCAA
GAAGTCATCG ATTTTGGTTG TGGCTCAGGT ATTTTGGCTA TTGCCGCCAT TAAACTCGGC
GCCAAAAAAG TGACCGGTGT TGATATTGAT TATCAGGCTA TTGACGCTTC AAAAGCCAAT
GCTGAACGTA ACGATGTAGT TGATAAATTG GCCCTATATT TACCAGAAGA TCAACCAGCC
AACTTACAAG CAGACGTATT AGTCGCTAAT ATTCTTGCTG GTCCGTTAAA AGAGTTAGCA
CCTTTGATAG CTGAGAAAGT CAAAATAGGT GGAAAACTGG CGCTATCGGG TTTATTGCAA
GAACAAGCAC AAGAAGTATC CGACTTCTAC AGCCAATGGT TCATCATGGA TCCAGTAAGC
AACAAAGAAG ACTGGAGTCG CTTAACAGGA ATACGCAAGT AG
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| Protein sequence | MAWIQLRIHT HRDNADLLGD LLMDQGSLSI TYEDGQDEPI FEPKLGETPL WQDTVMIALF
DAGTDLAPTI EFLESMPFLG KGFNHKIEQV EDKDWIREWM DSFHPIQFGS RLWICPSWRE
IPDPTAVNVI LDPGLAFGTG THPTTALCLE WLDSLDLSNQ EVIDFGCGSG ILAIAAIKLG
AKKVTGVDID YQAIDASKAN AERNDVVDKL ALYLPEDQPA NLQADVLVAN ILAGPLKELA
PLIAEKVKIG GKLALSGLLQ EQAQEVSDFY SQWFIMDPVS NKEDWSRLTG IRK
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