| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3937 |
|---|
| Symbol | prmA |
|---|
| ID | 3567668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 4232766 |
|---|
| End bp | 4233656 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637682411 |
|---|
| Product | ribosomal protein L11 methyltransferase |
|---|
| Protein accession | YP_287135 |
|---|
| Protein GI | 71909548 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2264] Ribosomal protein L11 methylase |
|---|
| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.0015501 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTGGC AAAATGTCAG TTTTCTGACC GATGTGTCCC ATGCTGAGCC GATGTGCGAT
GCACTTCTCG AAGCGGGGGC GCTATCGGCC AGCATTGAGG ATGCCGATGC CGGCACGCCG
GACGAGCAGC CGCAGTTTGG CGAACCGGGT TCGGTAAATA CACCGGGCTG GATGCATTCG
CGCGTTGTCG TGTTGCTCGA ACCGGATGCG GATATCGAGG CCCTCCTTGC TGAGGCGGGG
GCTGCCATCG GCTTGTCTGA AATCCCGGCA TATTCTGTCG AGAACGTCGC CGAGCAGAAC
TGGGTCCAGC TAACCCAGTC GCAGTTCGAC CCGATCCGTG TCTCGGAGCG CCTGTGGATT
GTTCCTTCCT GGCATGAAAC TCCCGATCCG GCTGCGGTTA ACCTGATCCT CGACCCCGGC
ATGGCTTTTG GAACCGGCTC GCATCCGACC ACCCGGCTTT GTCTGGAATG GCTGGAGCGC
AATGTCTCCG AAGCTTGCAC GGTACTTGAT TACGGCTGTG GCTCAGGCAT TCTGGCCATT
GCTGCGGCGC GCCTGGGGGC CGGCCATGTC GCAGGTGTCG ATATCGATCC GCAGGCCGTT
GAGGCGGCGC GCGCCAATGC CGAGCGCAAT GGCGTGACAG CGTTGTTTGC TGATTCGGCG
ACGCCGGTCG CTGGCGAGTA CGATGTGGTT GTTGCCAACA TCCTGTCCAA TCCCTTGCGT
GTGCTCGCGC CTGCCATTTG TGCGCATGTC CGCCCGGGCG GCAAGTTGGC CTTGTCCGGT
ATCCTGCGCG AGCAGATCGA CGAAATCATC GCCATCTACG CGCAGTGGAT TCCGCTGCAA
GTAGCCGATG TGCGTGAAGA CTGGGTATGT CTGGCCGGGA TCAAGCCCTG A
|
|---|
| Protein sequence | MGWQNVSFLT DVSHAEPMCD ALLEAGALSA SIEDADAGTP DEQPQFGEPG SVNTPGWMHS
RVVVLLEPDA DIEALLAEAG AAIGLSEIPA YSVENVAEQN WVQLTQSQFD PIRVSERLWI
VPSWHETPDP AAVNLILDPG MAFGTGSHPT TRLCLEWLER NVSEACTVLD YGCGSGILAI
AAARLGAGHV AGVDIDPQAV EAARANAERN GVTALFADSA TPVAGEYDVV VANILSNPLR
VLAPAICAHV RPGGKLALSG ILREQIDEII AIYAQWIPLQ VADVREDWVC LAGIKP
|
|---|
| |