| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1101 |
|---|
| Symbol | prmA |
|---|
| ID | 4011935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1134559 |
|---|
| End bp | 1135455 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637940778 |
|---|
| Product | ribosomal protein L11 methyltransferase |
|---|
| Protein accession | YP_547951 |
|---|
| Protein GI | 91786999 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2264] Ribosomal protein L11 methylase |
|---|
| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0205003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGT TCGAACTGAT TCTGCTGGCG CCCGTTGATG AGATAGAGAC GCTCAGCGAG
GCGCTGGATG CGCTGGATGC GCTCAGTGTG TCGGTGGAAG ACGCGGACGC CCAGACACCT
GCCGAGCAGG CGCTCTTTGG CGAGCCCGGC ATGCCACCAC CGAAGGCCGG CTGGGAGCGC
TCGCGCGTGG TGTCGCTGTT TGCCTCCGAG GCCCTGGCGC GGGACGCCGC CTCCGTCCTT
ACTGCCCAGG ATTTTTTTGC GGGCTGCCAG CTGGTGGCGA TTCAGGCCGT GCCCGAGCAG
GATTGGGTCC GGCTCACGCA GTCGCAGTTC ACGCCAGTAG AAATTACGCC TGAATTCTGG
ATCGTGCCGA CCTGGCACGA ACCGCCTGAA CAGGCAAAGC AGCTCATCCG TCTGGATCCG
GGCCTGGCGT TTGGCACGGG CACCCACCCC ACCACCCGCA TGTGCCTGCG CTGGATTGCC
GGCCAGGGCG CGGCGAACAA GCCATTGGCC CGTGTACTCG ACTATGGCTG TGGCTCGGGC
ATTCTGGCTA TTGGCGCTGC CAAGTTTGGG GCGGTCGATA TTGATGCCGT CGATATTGAC
GAAGCCGCTG TCGAGTCCAC ACGCGCCAAC GCCGAGGCCA ACCATGTCAC CCTGAATGCC
GGCTTGCCTG ACAAGGCGGT GGGTGCCTAC CAGACCGTGC TTGCGAATAT TCTGGCGACG
CCGCTGAAAG TGCTGGCGCC GCTGCTGTGC TCACATGTTC AAAAGGGCGG GAGTCTGGTG
CTCGCCGGCA TTCTGGAGCG CCAGGCCGAC GAACTTAAGG CGGCCTATCA GCCTTATTGC
CAGCTCCAGG TGCTCGACCA GGAAGAGGGC TGGATCCTGA TGGGCGCGCG GTTTTAA
|
|---|
| Protein sequence | MSLFELILLA PVDEIETLSE ALDALDALSV SVEDADAQTP AEQALFGEPG MPPPKAGWER
SRVVSLFASE ALARDAASVL TAQDFFAGCQ LVAIQAVPEQ DWVRLTQSQF TPVEITPEFW
IVPTWHEPPE QAKQLIRLDP GLAFGTGTHP TTRMCLRWIA GQGAANKPLA RVLDYGCGSG
ILAIGAAKFG AVDIDAVDID EAAVESTRAN AEANHVTLNA GLPDKAVGAY QTVLANILAT
PLKVLAPLLC SHVQKGGSLV LAGILERQAD ELKAAYQPYC QLQVLDQEEG WILMGARF
|
|---|
| |