Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3442 |
Symbol | prmA |
ID | 5079833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 4013025 |
End bp | 4013906 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640500641 |
Product | ribosomal protein L11 methyltransferase |
Protein accession | YP_001184951 |
Protein GI | 146294527 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2264] Ribosomal protein L11 methylase |
TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.116345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTGGA TCCAACTCCG CATAAACACC AATAGCGATG ATGCTGAAAC CATTAGCGAC TTACTCATGG AAGAAGGTTC AGTCTCAATC ACCTTCGAAG ACGGAAAAGA CACACCGATT TTTGAACCTA AACTGGGCGA AACCCCATTG TGGCGTGATA CTGTGGTCGT CGCGTTGTTC GAAGCGGACA CCGACCTCAC CCCAACAATA GAAATGCTAA AAACCCTGCC ATTTTTAGGC GACAACTTCA GCCATAAAAT TGAGCAGATT GAAGACAAAG ATTGGGTGCG CGAGTGGATG GATAACTTCC ATCCTATCCA ATTTGGCTCT CGTTTATGGA TTTGCCCAAG CTGGCGCGAA ATCCCTGATC CAACCGCAGT CAATGTTATC CTCGATCCAG GTCTAGCCTT CGGCACCGGC ACTCACCCAA CCACTGCACT GTGTTTAGAG TGGTTAGACA GTCTAGATTT AAGCAATGAA GAAGTGATCG ACTTTGGTTG TGGCTCCGGT ATCTTAGCCG TGGCCGCACT AAAACTTGGC GCGAAAAAAG TCACAGGTAT CGATATCGAC TATCAAGCCA TTGACGCCTC ACGTGCTAAT GCCGAGCGCA ATAATGTCGC CGACAAGCTG GCGTTGTACT TACCTGAAGA TCAACCCGCC GATCTTAAGG CAGACGTATT AGTGGCTAAC ATCCTCGCAG GCCCACTGCG TGAACTTGCT CCACTTATCG CTGAACGGGT AAAAAGTGGT GGTAAATTAG CGCTTTCAGG CCTTCTCAAA GAACAAGCGC AAGAAATCTC AGACTTTTAC AGCCAATGGT TCGATATGGA CGAAGCAGCT CACAAAGAAG ACTGGAGTCG CTTGACAGGT AAGCGTAAAT AG
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Protein sequence | MPWIQLRINT NSDDAETISD LLMEEGSVSI TFEDGKDTPI FEPKLGETPL WRDTVVVALF EADTDLTPTI EMLKTLPFLG DNFSHKIEQI EDKDWVREWM DNFHPIQFGS RLWICPSWRE IPDPTAVNVI LDPGLAFGTG THPTTALCLE WLDSLDLSNE EVIDFGCGSG ILAVAALKLG AKKVTGIDID YQAIDASRAN AERNNVADKL ALYLPEDQPA DLKADVLVAN ILAGPLRELA PLIAERVKSG GKLALSGLLK EQAQEISDFY SQWFDMDEAA HKEDWSRLTG KRK
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