| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_05251 |
|---|
| Symbol | prmA |
|---|
| ID | 4777423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | + |
|---|
| Start bp | 513499 |
|---|
| End bp | 514404 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640086030 |
|---|
| Product | ribosomal protein L11 methyltransferase |
|---|
| Protein accession | YP_001016542 |
|---|
| Protein GI | 124022235 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2264] Ribosomal protein L11 methylase |
|---|
| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCTG CTTCTGCTTG TTGCTGGTGG CGTCTTGCCC TGCCCATTGC AGATGAACTG
GAAGAGTCGC TCATCTGGAA GCTGACAGAG CTGGGCATCT CTCGAATCGC TGTTCAACAT
GTACCTGAGA AGGCTGAGCG CACCCTGTTG GCATGGTTGC CATCGTCTGA GTGGTCCGAG
TCGGACAGAG ATCAGCTGAT GGTCAACCTG CGTCCTCTGG CAGAACCATT TGGCCTGCAA
TTAGCCAACC CCACTTGGTG CGAGGTGGCC GATGAAGACT GGAGTTTGAA CTGGAAGCAA
CATTGGCAAT CCGATCCGGT GGGGCAGCGT CTATTGATCT TGCCGGCTTG GTTGGATCTG
CCGCAGGAGT ATGCCGATCG GCTTGTTGTG CGAATGGACC CTGGCAGTGC TTTTGGTACT
GGCAGCCATC CCAGCACTCG CCTTTGCCTG GAGGCGCTAG AGAAGAACCC CCCGCTGGGC
TTGAGGGTGG CAGATCTCGG CTGTGGCAGT GGGGTGTTGG GTTTCGCCGC ATTGGGTTTT
GGGGCCAGGC AGGTGCTGGC CGCTGATACG GATTCTCAGG CTGTCTGCGC CTCTAGAGCC
AATGCAGAGC TCAATCAGCT CGATTTAGAT CGTTTCAGGG TTGTGCATGG TTCTGTGGAT
GCTTTGTCAG CGCAGTTGCA GGGAGAGGTC GTCGACCTAC TGCTCTGCAA CATCCTTGCT
CCTGTGATTG AGGCTTTGGC TTCAAGCTTT GATCAGTTGT TGAGTGCGAA TGGTCGATGT
TTGCTCAGTG GTTTGCTGGT TGATCAAGCG CCAAGGCTTC AGGTGGTTTT GGAGGCGCTG
GGATGGCGGG TGAATAGCCT GACTGTGCAG GGCTGCTGGG GGCTTTTAGA TGTTTCTAAG
CGGTAA
|
|---|
| Protein sequence | MNSASACCWW RLALPIADEL EESLIWKLTE LGISRIAVQH VPEKAERTLL AWLPSSEWSE
SDRDQLMVNL RPLAEPFGLQ LANPTWCEVA DEDWSLNWKQ HWQSDPVGQR LLILPAWLDL
PQEYADRLVV RMDPGSAFGT GSHPSTRLCL EALEKNPPLG LRVADLGCGS GVLGFAALGF
GARQVLAADT DSQAVCASRA NAELNQLDLD RFRVVHGSVD ALSAQLQGEV VDLLLCNILA
PVIEALASSF DQLLSANGRC LLSGLLVDQA PRLQVVLEAL GWRVNSLTVQ GCWGLLDVSK
R
|
|---|
| |