| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1496 |
|---|
| Symbol | prmA |
|---|
| ID | 5747052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1675075 |
|---|
| End bp | 1675965 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641296576 |
|---|
| Product | ribosomal protein L11 methyltransferase |
|---|
| Protein accession | YP_001562525 |
|---|
| Protein GI | 160896943 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2264] Ribosomal protein L11 methylase |
|---|
| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAGT TGAGCCTGCT GTGCCCGGAA GACCGGGTTG AGACCGTCAG CGATGCGCTG
GATGCGCTGG ACGCCCTGAG CGTATCGGTG GAGGATGCCG ACGCGCAGAC CGAGGCCGAG
CAAGCCCTGT TCGGCGAGCC CGGCATGCCG CCGCCCAAGG ACGGCTGGCA GCGCAGCCGC
CTGGTGGCGC TGTTCCCCTC GCAGCAAGCG GCCGAAGAGG CGCGTGATCT GCTGCTGCCC
CAGGACTTCT TCGAGGGCTG CAGCATCATC GCCGTCAAGC AGGTGCCGGA GCAGGACTGG
GTGCGCCTGA CGCAATCGCA GTTCGCCCCG GTGGACATCA CGCCCGAATT CTGGATTGTT
CCCACCTGGC ACGAGCTGCC GCCCGAGGCG CGCGTGAGCA TCCGCCTGGA CCCGGGCCTG
GCCTTTGGCA CGGGCACGCA CCCGACCACG CGCATGTGCC TGCGCTGGAT CGCCCGCCAG
CCCCAAGGCA GTCTTGGCCG CACGCTGGAC TACGGCTGCG GCTCGGGCAT CCTGGCCATT
GGCGCAGCCA AGTTCGGTGC CACCGACATC GACGCGGTGG ACATCGACCC GGCTGCCGTG
GAGTCCACGC GCTACAACGC CGATGCCAAC GCCGTGCAAC TGAAGGCGGG TCTGCCCGAT
GCCGGCAACG GCGAATACCG CACCGTGCTG GCCAACATCC TGGCCACGCC GCTCAAGGTG
CTGGCGCCGC TGCTGTGCGG CCGCGTGGCA GCAGGTGGAA GCCTGGTGCT GGCCGGTATC
CTGGAGCGCC AGGCCGACGA GCTCAAGGAG GCCTATGCGC CGTACCTGGC GCTGGAAGTG
GCCGACAGCG AAGATGGCTG GATCCTGATG ACCGCGCGCC GCGCGGCCTG A
|
|---|
| Protein sequence | MFELSLLCPE DRVETVSDAL DALDALSVSV EDADAQTEAE QALFGEPGMP PPKDGWQRSR
LVALFPSQQA AEEARDLLLP QDFFEGCSII AVKQVPEQDW VRLTQSQFAP VDITPEFWIV
PTWHELPPEA RVSIRLDPGL AFGTGTHPTT RMCLRWIARQ PQGSLGRTLD YGCGSGILAI
GAAKFGATDI DAVDIDPAAV ESTRYNADAN AVQLKAGLPD AGNGEYRTVL ANILATPLKV
LAPLLCGRVA AGGSLVLAGI LERQADELKE AYAPYLALEV ADSEDGWILM TARRAA
|
|---|
| |