Gene Synpcc7942_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1500 
SymbolprmA 
ID3773673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1549179 
End bp1550078 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content58% 
IMG OID637799933 
Productribosomal protein L11 methyltransferase 
Protein accessionYP_400517 
Protein GI81300309 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2264] Ribosomal protein L11 methylase 
TIGRFAM ID[TIGR00406] ribosomal protein L11 methyltransferase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGTCA GTCAATCGTG GTGGCAGGTC GAGGTTCACT GCGACCCCCT GCTGGAAGAC 
CTACTCTATT GGCGGCTGTC AGAGGCGGGG GGACGGGGTT TTGTCTGTGA AAGCAAAGCC
CAAGGCTTGC AAGTCCATAG CTATTTTCCG GCGGAGCTGT GGGAGGAGAC GATTCGCGAT
CGCCTCCTGC AAGAGATCAA TGCTGATGCT GCGGATCTCG GCTTGCCCAC ACCCAGTTTG
AGCTGGCAGA CCCTCGATGA AGAGGATTGG TCTGAGAGCT GGAAACGCCA CTGGCAACCC
CAAGAGCTGG GCGATCGCTT CTTGATTCAA CCAGCCTGGT TGGAACCAGA ACCCAGCGAT
CGCTTGCTGC TGCAGCTTGA TCCCGGCACC GCCTTTGGTA CCGGAGCTCA TCCCACCACG
CAGCTTTGTT TAGAGGGGCT GGAAACGGTT CCGGTTGCCG ACAAGGTGAT CGCCGATGTC
GGCTGTGGCT CTGGCATTTT GGCGATCGGG GCACTGCTGC TCGGGGCCAA ACAGGTCTAC
GCGGTGGACA CCGATCCCCT CGCGGTTGGG GCAACCCAAG CTAACGCCGC CTTAAATGAT
TTGGAAGGCG ATCGCTTCTG GACCGCGATC GGCAGTGCGG ATCAACTGCA GCCGCTGCAT
GCGCAGGGCG TTCGATTTGA CGGCTTTTTG TGCAACATCT TGGCGCACAT CATCCAAGCT
CTAACACCGA CGCTGTCTGA GTTGGCTAGT CCTGGCAGCT GGGCAATCTT TAGCGGCTTG
CTAACCAGTC AAGCCGACAC TGTCAGCGTC ACTTTGGAAG AGTACGGTTG GGTGATCCGC
GATCGCGCCA GTCAGGGAGA TTGGTGTCGT TTGGTCGCGG ATTTTCGGCC GGAACGATAA
 
Protein sequence
MPVSQSWWQV EVHCDPLLED LLYWRLSEAG GRGFVCESKA QGLQVHSYFP AELWEETIRD 
RLLQEINADA ADLGLPTPSL SWQTLDEEDW SESWKRHWQP QELGDRFLIQ PAWLEPEPSD
RLLLQLDPGT AFGTGAHPTT QLCLEGLETV PVADKVIADV GCGSGILAIG ALLLGAKQVY
AVDTDPLAVG ATQANAALND LEGDRFWTAI GSADQLQPLH AQGVRFDGFL CNILAHIIQA
LTPTLSELAS PGSWAIFSGL LTSQADTVSV TLEEYGWVIR DRASQGDWCR LVADFRPER