| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2623 |
|---|
| Symbol | prmA |
|---|
| ID | 8020287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2759918 |
|---|
| End bp | 2760814 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644831403 |
|---|
| Product | ribosomal protein L11 methyltransferase |
|---|
| Protein accession | YP_002982566 |
|---|
| Protein GI | 241664206 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2264] Ribosomal protein L11 methylase |
|---|
| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.906319 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGTACC GGGAATGCGT GCTCGAAGTG GCGCGTGACG ACGCCGAAGC GTTGTCCGAA
GCACTGTTTG ATCTTGGCGC GCTGTCGGTC TCGGTGGAGG ACGCCGATGC CGACACGCCC
GAAGAGCAGC CGCTCTTTGG CGAGCCCGGC CACGAACCGA CACGCCTGGC TTGGAACCGC
TCGCGCGTGG TTGCCCTGCT CGCAGAGGAT GCCGATCCGG CATTGCTGGT GGCAGCCGCA
GCCAACGAGA TCAACCTCTC GCCGTTGCCC GCGTACACGG TGCGCGAAGT CGAAGAGCAG
GACTGGGTGC GCGTGACGCA ATCGCAGTTC GAGCCGATCC ACATTGGTGA GCACATCTGG
GTCGTGCCGT CCTGGCACGA CGCGCCGGAA CCCGACGCCG TGGTACTCGA ACTGGACCCC
GGCCTCGCGT TCGGCACCGG CAGCCACCCG ACCACGCGCC TGTGCATGGA ATGGCTGGAG
CAGCACGTGC AACCCGGCGA ACGCACGCTC GACTACGGTT GCGGCTCGGG CATTCTGGCC
ATCGTCGCCA AGAAGCTCGG CGCCGGCGAA ACCGTCGGTG TCGACATCGA TCCGAATGCG
GTCGAAGCCT CGCGCTACAA CGCCGAGCGC AACCACGTCG AAGCCACGTT TGCCCTGCCC
GACGATGCAC CGGAAGGCAC GTTCGATCTG GTCGTCGCCA ACATCCTGTC GAACCCGCTC
AAGTTGATGG CAGCCATGCT GTGCGCACGC GTGCGGCCGG GCGGCCGGCT GATTCTGTCG
GGCGTGCTAG AGCGCCAGGC CGAAGAAGTT GCCGCTGCGT ACGCCTCCGC CATTCCGCTT
ACCGTGTGGC GCGCACGTGA CGGCTGGGTC TGCCTGCGTG GTGTGAAGCC GACGTAA
|
|---|
| Protein sequence | MTYRECVLEV ARDDAEALSE ALFDLGALSV SVEDADADTP EEQPLFGEPG HEPTRLAWNR
SRVVALLAED ADPALLVAAA ANEINLSPLP AYTVREVEEQ DWVRVTQSQF EPIHIGEHIW
VVPSWHDAPE PDAVVLELDP GLAFGTGSHP TTRLCMEWLE QHVQPGERTL DYGCGSGILA
IVAKKLGAGE TVGVDIDPNA VEASRYNAER NHVEATFALP DDAPEGTFDL VVANILSNPL
KLMAAMLCAR VRPGGRLILS GVLERQAEEV AAAYASAIPL TVWRARDGWV CLRGVKPT
|
|---|
| |