| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3224 |
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| Symbol | prmA |
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| ID | 4605471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3817648 |
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| End bp | 3818535 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782640 |
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| Product | ribosomal protein L11 methyltransferase |
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| Protein accession | YP_929096 |
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| Protein GI | 119776356 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2264] Ribosomal protein L11 methylase |
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| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.105508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTGGA TCCAATTGCG CCTGCATTCA AGCAGCGAAC ACGCCGATGC CATCAGCGAT
CTGTTGATGG ACGAAGGCTC TGTCTCCATC ACCTTTGAAG ATGGTAAAGA CCAACCCATT
TTCGAACCCA AGCTGGGTGA AACTCCGCTG TGGAACGATA CCGTGGTGGT GGCCCTGTTC
GATGCCGACT TCGATTTGGC CCCCGTGGTA GACATGCTCA AGTCCCTGCC TTTCCTTGGC
AGCGAGCTCA AGTACAAGAT TGAACAAATC GAAGACAAAG ACTGGGTGCG TGAATGGATG
GACAGCTATC ACCCCATCCA GTTCGGCAAG CGTCTGTGGA TTTGCCCAAG CTGGCGTGAA
GTGCCGGACC CAGAGGCCGT TAACGTGATC CTCGATCCGG GCCTGGCCTT TGGCACCGGT
ACCCACCCCA CCACGGCCCT GTGCCTTGAG TGGCTCGACA GCCTGGATTT GGCCGGCAAA
GACATTATCG ACTTTGGCTG CGGCTCAGGC ATCCTCGCCG TGGCCGCCCT TAAGCTGGGC
GCTGCCAAAG CGACCGGTAT CGACATCGAC TATCAGGCCA TCGACGCCTC CCGCGACAAC
GCCCAGCGTA ATCAGGTAGA AGACCGTCTC GCCCTCTATC TGCCCGAAGA CCAACCCGCT
GGCCTCAAGG CCGAAGTGTT GGTCGCCAAT ATTCTGGCTG GCCCACTGCG CGAACTGGCG
CCACTTATTC AGGCGCTGGT TCAGCCCGGT GGCAAGTTAG CCCTCTCGGG TTTGCTCAAA
GAACAGGCCG CAGAAATCAG TGAATGTTAC GCCCAGTGGT TTGACATGGA CCAACCTGCC
CACAAAGACG ACTGGAGCCG CTTGACAGGG GTACGCAAAT CGCTGTAA
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| Protein sequence | MPWIQLRLHS SSEHADAISD LLMDEGSVSI TFEDGKDQPI FEPKLGETPL WNDTVVVALF
DADFDLAPVV DMLKSLPFLG SELKYKIEQI EDKDWVREWM DSYHPIQFGK RLWICPSWRE
VPDPEAVNVI LDPGLAFGTG THPTTALCLE WLDSLDLAGK DIIDFGCGSG ILAVAALKLG
AAKATGIDID YQAIDASRDN AQRNQVEDRL ALYLPEDQPA GLKAEVLVAN ILAGPLRELA
PLIQALVQPG GKLALSGLLK EQAAEISECY AQWFDMDQPA HKDDWSRLTG VRKSL
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