| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0951 |
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| Symbol | prmA |
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| ID | 7970126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1044740 |
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| End bp | 1045624 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791547 |
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| Product | ribosomal protein L11 methyltransferase |
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| Protein accession | YP_002942868 |
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| Protein GI | 239813958 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2264] Ribosomal protein L11 methylase |
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| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGAAC TTCGCCTGAT GGCGCCGGAA GACCGGGTCG AAACGGTCAG CGACGCGCTC
GACGCACTCG ATGCGCTGAG CGTGTCGGTG GAAGACGCCG ATGCGCAGAC CGATGCGGAG
CAGGCGCTGT TCGGCGAGCC CGGCATGCCG CCGCCCAAGG AAGGCTGGCA GCGTTCGCGC
GTGATTGCGC TGTTTGCCGA TGAAGCGCTT GCGAAAGAGG CGGCGTCGGT GCTTGCGCTG
CAGGACTTCT TCGAAGGCTG CGCGGTGCTC GGCGTGGCAC CGGTGCCCGA GCAGGACTGG
GTGCGGCTCA CGCAATCGCA GTTCGCGCCG GTCGAGATCA CGCCCGAATT CTGGATCGTG
CCCACCTGGC ATGAGCCGCC CGCGCAGGCA AGGCAGGTGA TGCGGCTCGA CCCGGGGCTG
GCCTTTGGCA CCGGCACCCA TCCCACCACG CGCATGTGCC TGCGCTGGAT CGCAAGGCAG
GGTTCGTTCG CCGGCCAGCG CGTGCTCGAC TACGGCTGCG GCTCCGGCAT CCTGGCCATT
GGCGCGGCGA AGTTCGGCGC GACCGACATC GATGCCGTCG ACATCGACGA GGCGGCAGTG
TCGTCGACCC GCCTCAACGC CGAAGCCAAC GGCGTGCGCC TGAACGCCGG CCTGCCCGAA
GCGGCCAAGG GCAACTACGG CACCGTGCTG GCCAACATCC TGGCCACGCC ACTCAAGGTG
CTTGCGCCAC TGCTGCGCAG CCACGTGGCG CCCGGTGGAT CGCTGGTGCT GGCCGGCATC
CTCGAGCGCC AGGCCGACGA GCTGAAGGAA GCCTATGCGC CTTATGCCGC GCTCGAAGTC
AGCGACAGCG AGGACGGCTG GATCCTCATG ACGGCGCGCT GCTGA
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| Protein sequence | MFELRLMAPE DRVETVSDAL DALDALSVSV EDADAQTDAE QALFGEPGMP PPKEGWQRSR
VIALFADEAL AKEAASVLAL QDFFEGCAVL GVAPVPEQDW VRLTQSQFAP VEITPEFWIV
PTWHEPPAQA RQVMRLDPGL AFGTGTHPTT RMCLRWIARQ GSFAGQRVLD YGCGSGILAI
GAAKFGATDI DAVDIDEAAV SSTRLNAEAN GVRLNAGLPE AAKGNYGTVL ANILATPLKV
LAPLLRSHVA PGGSLVLAGI LERQADELKE AYAPYAALEV SDSEDGWILM TARC
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